Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 RN7SKP78-201ENST00000364711 318 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 RN7SKP292-201ENST00000365522 317 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 RNA5SP284-201ENST00000384547 118 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 RNU6-906P-201ENST00000384700 70 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 GPS2P1-201ENST00000411761 986 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 HMGB3P5-201ENST00000428894 612 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 MTATP6P17-201ENST00000431030 672 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 HMGB3P24-201ENST00000433260 622 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AC096775.1-201ENST00000437724 448 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 RPS23P9-201ENST00000448848 438 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 GAPDHP14-201ENST00000450472 937 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AC098826.2-201ENST00000452011 651 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AL445665.1-202ENST00000452436 324 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AL358876.1-201ENST00000453364 1075 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 RPL23AP12-201ENST00000467573 473 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 RPS17P15-201ENST00000475609 349 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AC005412.2-201ENST00000492004 341 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AC098862.1-201ENST00000504991 413 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 HPRT1P2-201ENST00000505250 544 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AC027026.1-201ENST00000532323 742 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 RBM22P1-201ENST00000578589 1214 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 LSM1P2-201ENST00000604911 322 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AC023813.4-201ENST00000607580 580 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 MIR7973-1-201ENST00000614683 76 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 MIR6133-201ENST00000617057 108 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 MFSD8-239ENST00000641590 2479 ntBASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 AC099786.3-201ENST00000565735 1410 ntBASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 AL159987.1-201ENST00000347911 293 ntBASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 RNU6-1339P-201ENST00000363574 91 ntBASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 RNU6-317P-201ENST00000384031 107 ntBASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 AL031985.1-201ENST00000392713 418 ntBASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 HMGB1P20-201ENST00000402555 677 ntBASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 AL590290.1-201ENST00000405336 380 ntBASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 SSR1P2-201ENST00000415208 787 ntBASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 GTF2IP2-201ENST00000424290 697 ntBASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 MTCYBP15-201ENST00000433123 1127 ntBASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 AC242426.1-201ENST00000435270 960 ntBASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 TPTE2P6-202ENST00000445572 1007 ntBASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 MTND1P33-201ENST00000446251 917 ntBASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
NECTIN3Q9NQS3 HMGB1P4-201ENST00000455362 567 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms