Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC243972.3-201ENST00000539655 198 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AL139300.2-201ENST00000556332 553 ntTSL 4 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AC093249.5-201ENST00000568120 430 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 GLUD1P4-201ENST00000590914 418 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AC003098.1-201ENST00000591540 494 ntTSL 3 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AC243960.5-201ENST00000597858 255 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AL390058.1-201ENST00000603834 629 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 RFPL3-AS1_1.1-201ENST00000617561 88 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 MED15P6-202ENST00000621415 787 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 FAM238C-205ENST00000640641 391 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 BCLAF1P2-201ENST00000624956 2609 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 RPS4XP5-202ENST00000449995 1334 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AC022325.1-201ENST00000502748 2199 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 SAMMSON-222ENST00000641901 2727 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 KCNIP1-209ENST00000616807 1448 ntTSL 5 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 ZNF300P1-201ENST00000356555 1822 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 RN7SKP204-201ENST00000365481 310 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 RN7SKP292-201ENST00000365522 317 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 BPIFA3-202ENST00000375454 1116 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 MIR623-201ENST00000384986 98 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 IGLV3-1-201ENST00000390319 398 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 RNU6-510P-201ENST00000391239 108 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 U3.29-201ENST00000391296 212 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 RNU6-1068P-201ENST00000410958 103 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 AC242426.2-201ENST00000446956 795 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 AC130689.1-201ENST00000451056 408 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 AL513533.1-201ENST00000453728 415 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 NDUFB11P1-201ENST00000455818 465 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 HNRNPCP10-201ENST00000457130 884 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 AC111000.3-201ENST00000508057 576 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 ALG1L12P-201ENST00000515046 434 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 RN7SKP277-201ENST00000516895 283 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 ATOX1-202ENST00000520382 466 ntTSL 5 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 ELOB-205ENST00000572954 331 ntTSL 2 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 RN7SL220P-201ENST00000581978 300 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 AC012511.1-201ENST00000608140 449 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 AL354740.1-202ENST00000612837 290 ntTSL 3 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 pRNA.12-201ENST00000614353 90 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 pRNA.3-201ENST00000615048 90 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 AC011840.6-201ENST00000624536 610 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 AC110769.3-201ENST00000624567 1173 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 TTC38-207ENST00000629918 162 ntTSL 5 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 PSMC1P7-201ENST00000495689 1315 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
RTN4Q9NQC3 AP000547.3-204ENST00000588548 2523 ntBASIC9.22□□□□□ -0.93
RTN4Q9NQC3 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
RTN4Q9NQC3 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC9.21□□□□□ -0.93
RTN4Q9NQC3 AC006020.1-201ENST00000420179 1854 ntBASIC9.21□□□□□ -0.93
RTN4Q9NQC3 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
RTN4Q9NQC3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
RTN4Q9NQC3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
RTN4Q9NQC3 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
RTN4Q9NQC3 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
RTN4Q9NQC3 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
RTN4Q9NQC3 RNU6-996P-201ENST00000365438 107 ntBASIC9.21□□□□□ -0.94
RTN4Q9NQC3 RNA5SP279-201ENST00000365513 117 ntBASIC9.21□□□□□ -0.94
RTN4Q9NQC3 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
RTN4Q9NQC3 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms