Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 RN7SL172P-201ENST00000460535 303 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AC104629.2-201ENST00000468627 598 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 RN7SL441P-201ENST00000492388 296 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 RFPL4AP3-201ENST00000515267 345 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 RNU6-1102P-201ENST00000516149 96 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 MTND5P21-201ENST00000531961 522 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AC008147.3-201ENST00000548666 354 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AL512310.9-201ENST00000553311 948 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AGGF1P9-201ENST00000561884 913 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AC006272.2-201ENST00000594725 163 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AC126915.2-201ENST00000610957 190 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AC037198.3-201ENST00000616754 526 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AC011447.7-201ENST00000624228 1590 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 OR10AB1P-202ENST00000641219 1686 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 AC235565.1-201ENST00000456962 1325 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 MTND4P9-201ENST00000507819 1346 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 SNORA63.3-201ENST00000362682 132 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 RNU6-171P-201ENST00000384354 107 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 RNU6-925P-201ENST00000384629 104 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 MIR600-201ENST00000385007 98 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 MIR223-201ENST00000385204 110 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 DUTP5-201ENST00000406790 469 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 AL356968.2-201ENST00000412769 1257 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 AC013429.2-201ENST00000418798 781 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 RPS4XP16-201ENST00000427198 791 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 FAR2P1-206ENST00000449736 709 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 EIF2S2P5-201ENST00000457635 968 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 AC018638.3-201ENST00000461273 132 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 AC105918.1-201ENST00000474399 838 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 AC072052.1-201ENST00000496556 306 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 AC067904.2-201ENST00000517322 1283 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 AC024940.3-201ENST00000538551 316 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 NDUFB4P11-201ENST00000560510 395 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 AC095055.1-201ENST00000603472 1113 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 AL512624.1-201ENST00000613638 469 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms