Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC006963.1-201ENST00000624003 1052 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 ZNF29P-201ENST00000225587 168 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 RN7SKP74-201ENST00000362849 309 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 SNORA16A-201ENST00000384342 137 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 SPTLC1P2-201ENST00000407089 121 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 RN7SKP59-201ENST00000410520 314 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AL445183.3-201ENST00000414168 502 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 UBE2V1P9-201ENST00000414760 368 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 BTF3P9-201ENST00000418784 283 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 CLUHP1-201ENST00000435012 1190 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 ELOCP11-201ENST00000436690 332 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC019185.1-201ENST00000442718 389 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 ELOCP16-201ENST00000444494 332 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC090804.1-201ENST00000448870 490 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC011225.1-201ENST00000457751 369 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 RN7SL610P-201ENST00000463845 291 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC100832.1-201ENST00000471945 383 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 SYT14P1-201ENST00000481459 721 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 RN7SL30P-201ENST00000488416 306 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC010374.1-201ENST00000503762 1237 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC006499.3-201ENST00000506077 748 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC021483.2-201ENST00000567415 758 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC106734.1-201ENST00000568646 663 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AP000919.1-202ENST00000581139 1264 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC010245.2-201ENST00000606908 1167 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AL021707.7-201ENST00000607991 416 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AL159169.2-201ENST00000610061 1269 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC037198.3-201ENST00000616754 526 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC008115.4-201ENST00000619780 775 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 MIR8080-201ENST00000622224 89 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 AC006927.2-201ENST00000639256 389 ntBASIC5.6□□□□□ -1.51
USP29Q9HBJ7 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USP29Q9HBJ7 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC053481.2-202ENST00000582394 1500 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 CDC27P2-201ENST00000425026 1922 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 RNA5SP319-201ENST00000362768 119 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 RNU5B-4P-201ENST00000363508 111 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC234772.1-201ENST00000377927 937 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC009804.1-201ENST00000400949 179 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC115285.1-201ENST00000424879 736 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 MTCO1P43-201ENST00000431831 488 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 MTND1P31-201ENST00000449206 961 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC020898.1-201ENST00000474167 787 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC098583.1-201ENST00000480875 255 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 RPL21P47-201ENST00000483696 477 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms