Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 Z97832.1-201ENST00000402490 328 ntBASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 TMBIM7P-201ENST00000418074 855 ntBASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 RPL34P20-201ENST00000442771 351 ntBASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 AC069277.2-201ENST00000454211 432 ntBASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 AC107918.3-201ENST00000533272 382 ntBASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 TVP23CP2-201ENST00000571473 623 ntBASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 MIR4489-201ENST00000578869 62 ntBASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 MIR1269B-201ENST00000580405 75 ntBASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 RN7SL435P-201ENST00000584418 282 ntBASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 SNX6P1-201ENST00000601728 1224 ntBASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 AC012213.4-201ENST00000606457 354 ntBASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 AC019206.1-201ENST00000621938 425 ntBASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 AL731566.1-201ENST00000620490 1937 ntBASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 CASC19-281ENST00000642118 1554 ntBASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 UGT2B26P-201ENST00000508672 1613 ntBASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 RNU4-44P-201ENST00000363050 141 ntBASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 RNU6-171P-201ENST00000384354 107 ntBASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AC005033.1-201ENST00000428904 813 ntBASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AC092162.1-201ENST00000432828 434 ntBASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 SCAND3P1-201ENST00000439854 1060 ntBASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AC093890.1-201ENST00000502554 540 ntBASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 Y_RNA.719-201ENST00000517156 106 ntBASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AL627230.1-201ENST00000613077 211 ntBASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AL591926.8-201ENST00000616876 211 ntBASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AL590763.1-201ENST00000398297 1545 ntBASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 AC107068.1-201ENST00000563286 4218 ntBASIC5.02□□□□□ -1.61
LRRC40Q9H9A6 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 AC009643.2-201ENST00000603543 1448 ntBASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 RNA5SP455-201ENST00000365190 119 ntBASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 AC005522.1-201ENST00000395416 346 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms