Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 AC007383.1-201ENST00000445875 636 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 RN7SL587P-201ENST00000459853 281 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 RPL12P40-201ENST00000467028 488 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 AC128713.1-201ENST00000471495 306 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 AC098583.1-201ENST00000480875 255 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 RPL19P11-201ENST00000495944 589 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 PABPC1P1-201ENST00000506347 591 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 RNU6-202P-201ENST00000515998 96 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 RN7SKP219-201ENST00000516825 296 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 CCL26-201ENST00000005180 526 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 MYL12AP1-201ENST00000518490 515 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 SSR2-215ENST00000529008 849 ntTSL 5 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 PPIAP6-201ENST00000557078 499 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 AC102941.1-201ENST00000567616 1537 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 AC009171.1-201ENST00000572673 266 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 AC007485.1-201ENST00000616755 206 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 AL356274.1-201ENST00000617064 410 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 MAPK10-329ENST00000641555 2656 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USB1Q9BQ65 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
USB1Q9BQ65 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 CASR-201ENST00000490131 4015 ntTSL 5 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USB1Q9BQ65 MFF-206ENST00000392059 1710 ntTSL 5 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USB1Q9BQ65 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USB1Q9BQ65 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USB1Q9BQ65 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USB1Q9BQ65 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
USB1Q9BQ65 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USB1Q9BQ65 RPL12-201ENST00000361436 633 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
USB1Q9BQ65 Y_RNA.209-201ENST00000364156 111 ntBASIC7.13□□□□□ -1.27
USB1Q9BQ65 RNU6-343P-201ENST00000364709 104 ntBASIC7.13□□□□□ -1.27
USB1Q9BQ65 RN7SKP119-201ENST00000410753 273 ntBASIC7.13□□□□□ -1.27
USB1Q9BQ65 HNRNPDLP1-201ENST00000412834 550 ntBASIC7.13□□□□□ -1.27
USB1Q9BQ65 GNAI2P2-201ENST00000417003 916 ntBASIC7.13□□□□□ -1.27
USB1Q9BQ65 AL672212.1-201ENST00000422246 400 ntBASIC7.13□□□□□ -1.27
USB1Q9BQ65 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 OR4K11P-201ENST00000431829 904 ntBASIC7.13□□□□□ -1.27
USB1Q9BQ65 AF228730.2-201ENST00000438784 848 ntBASIC7.13□□□□□ -1.27
USB1Q9BQ65 RPL36AP15-201ENST00000444514 266 ntBASIC7.13□□□□□ -1.27
USB1Q9BQ65 LINC00265-202ENST00000448955 468 ntTSL 2 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 IGKV2-36-201ENST00000519999 223 ntBASIC7.13□□□□□ -1.27
USB1Q9BQ65 GZMB-205ENST00000526004 819 ntTSL 3 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 AP003497.1-201ENST00000528472 562 ntBASIC7.13□□□□□ -1.27
USB1Q9BQ65 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 DUX4L52-201ENST00000549363 777 ntBASIC7.13□□□□□ -1.27
USB1Q9BQ65 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 AC126323.4-201ENST00000566935 234 ntBASIC7.13□□□□□ -1.27
USB1Q9BQ65 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 OR4K8P-201ENST00000578842 1048 ntBASIC7.13□□□□□ -1.27
USB1Q9BQ65 SNORD39.3-201ENST00000584451 71 ntBASIC7.13□□□□□ -1.27
USB1Q9BQ65 APOC2-202ENST00000585786 880 ntTSL 2 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 APOC2-204ENST00000591597 447 ntTSL 5 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USB1Q9BQ65 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC7.13□□□□□ -1.27
USB1Q9BQ65 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms