Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC005000.2-201ENST00000605468 310 ntBASIC3.9□□□□□ -1.78
CSMD1Q96PZ7 AC091979.2-201ENST00000607514 214 ntBASIC3.9□□□□□ -1.78
CSMD1Q96PZ7 AL138721.1-201ENST00000616756 179 ntBASIC3.9□□□□□ -1.78
CSMD1Q96PZ7 U6.105-201ENST00000637379 88 ntBASIC3.9□□□□□ -1.78
CSMD1Q96PZ7 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 UBE2DNL-203ENST00000474922 222 ntBASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 AC010460.1-201ENST00000507087 466 ntBASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 AC112484.5-201ENST00000624189 228 ntBASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 AL356121.2-201ENST00000624715 780 ntBASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 AP005435.3-201ENST00000531260 3198 ntBASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 AC025574.1-201ENST00000554784 1653 ntBASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CSMD1Q96PZ7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 LRRC37BP1-201ENST00000398851 714 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 RNU4-64P-201ENST00000410795 131 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 AC005899.7-201ENST00000618199 588 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 MIR6839-201ENST00000620425 113 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 AP001002.1-201ENST00000625148 1513 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 BX276092.6-201ENST00000430476 250 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 AC236972.1-201ENST00000433225 199 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 TMX2P1-201ENST00000436507 708 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 BX276092.8-201ENST00000455722 250 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 IGBP1P4-201ENST00000503202 879 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 RPL23AP94-201ENST00000512518 302 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 AC026403.1-201ENST00000518938 295 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 OR5BC1P-201ENST00000529327 739 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 RN7SL290P-201ENST00000578661 300 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 AC019176.2-201ENST00000611579 315 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 MIR3653-201ENST00000625572 110 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 RNA5SP124-201ENST00000362739 110 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 MIR34B-201ENST00000385076 84 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 AC017019.1-201ENST00000426129 261 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 PLGLA-201ENST00000465668 449 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 AC022133.1-201ENST00000490961 571 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 AC007342.8-201ENST00000623278 678 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 AC099654.3-201ENST00000447087 1546 ntBASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSMD1Q96PZ7 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 OR14L1P-202ENST00000641545 3009 ntBASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 AL122016.1-201ENST00000403365 367 ntBASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 AL390316.1-201ENST00000406279 553 ntBASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 AC053481.1-201ENST00000467217 306 ntBASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 uc_338.7-201ENST00000621834 124 ntBASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms