Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 GAPDHP49-201ENST00000421421 961 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 CYCSP52-201ENST00000422857 310 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AC068522.1-201ENST00000482895 345 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 RPS27P20-201ENST00000492051 246 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AC122718.2-201ENST00000505325 591 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AP002812.4-201ENST00000532139 286 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 OR11J2P-201ENST00000555298 907 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 GTF2IP8-201ENST00000560687 584 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AC012417.1-201ENST00000582307 1039 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AC067852.5-201ENST00000589299 310 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AL589863.1-201ENST00000595383 631 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AL353726.1-201ENST00000614041 1000 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AC125238.2-201ENST00000430003 1440 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AL161901.1-201ENST00000624954 3425 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 RNY4P24-201ENST00000362735 96 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 RNA5SP333-201ENST00000363466 118 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 RNA5SP334-201ENST00000364825 118 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AL050335.1-201ENST00000396909 869 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 CYCSP45-201ENST00000402289 315 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 NCSTNP1-201ENST00000406229 144 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AL157884.1-201ENST00000424561 454 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 ISCA1P1-201ENST00000426679 387 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 MTCO2P19-201ENST00000427513 598 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 RPL31P54-201ENST00000429803 370 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 MTND1P2-201ENST00000430604 821 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 UBE2V1P8-201ENST00000437166 265 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AL121601.2-201ENST00000438019 707 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 ARMC4P1-201ENST00000438905 707 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AC007383.1-201ENST00000445875 636 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AC097359.1-201ENST00000447946 463 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 COX6CP18-201ENST00000448769 222 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 FGF7P6-202ENST00000451282 293 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AL358876.1-201ENST00000453364 1075 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AC021205.1-201ENST00000468797 348 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AC079841.1-201ENST00000481228 950 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 GM2AP2-201ENST00000491764 562 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 FTH1P8-201ENST00000498161 514 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 NPM1P27-201ENST00000502784 830 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 TCP11X3P-202ENST00000514289 1254 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms