Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 AL645608.4-201ENST00000423619 154 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 AL360081.1-201ENST00000428299 555 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 AC008072.1-201ENST00000434254 824 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 TCEA1P3-201ENST00000443005 880 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 BTF3P6-201ENST00000448054 499 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 AC091685.2-201ENST00000454924 864 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 AC083982.1-201ENST00000485679 344 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 IGLV2-34-201ENST00000490007 283 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 BUD31P1-201ENST00000521828 359 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 AL049830.4-201ENST00000555149 351 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 AL049839.1-201ENST00000556151 657 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 MIR3667-201ENST00000581025 74 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 MIR4480-201ENST00000582492 71 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 AC008536.1-201ENST00000602872 669 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 AC004948.1-201ENST00000609858 672 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 Z95331.1-201ENST00000623075 23112 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 AC009643.2-201ENST00000603543 1448 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 SDAD1P1-202ENST00000524156 2051 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 RPL10P10-201ENST00000403509 664 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AL589994.1-201ENST00000404962 340 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AC016769.2-201ENST00000414815 475 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AC004074.1-201ENST00000421810 1063 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AC092162.1-201ENST00000432828 434 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AC234781.3-201ENST00000452540 973 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AC093166.2-201ENST00000455969 1017 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AGGF1P3-201ENST00000493675 1213 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 RN7SL558P-201ENST00000497468 299 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 SCARNA22-201ENST00000503991 125 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 ENPP7P9-201ENST00000514456 627 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 HNRNPRP2-201ENST00000528421 743 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AC234775.3-201ENST00000564612 656 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 UBE2FP2-201ENST00000566646 462 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 RN7SL802P-201ENST00000577858 299 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AL512782.1-201ENST00000603093 364 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AL121932.1-201ENST00000605542 214 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AL589935.2-201ENST00000616471 1231 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 NCLP2-201ENST00000416078 1462 ntBASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
ECHDC3Q96DC8 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 AC103591.2-201ENST00000265259 766 ntBASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 RNA5SP191-201ENST00000362585 102 ntBASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 LINC00993-201ENST00000420453 540 ntBASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 USP9YP9-201ENST00000429406 715 ntBASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 AL049745.1-201ENST00000433953 286 ntBASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 VN1R96P-201ENST00000446052 858 ntBASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 AL589765.3-201ENST00000446084 462 ntBASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 AC002553.2-201ENST00000453217 340 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms