Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RN7SL72P-201ENST00000460697 269 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 MTND6P2-201ENST00000512226 524 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AC107958.1-201ENST00000556576 290 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 MTCYBP13-201ENST00000578634 1093 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 PRPF19P1-201ENST00000584766 898 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AC012616.1-201ENST00000600294 197 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AL138895.2-201ENST00000603019 178 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AC108865.2-201ENST00000606881 432 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AC024060.1-201ENST00000607052 494 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 MIR193BHG-214ENST00000641765 509 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
ATG4AQ8WYN0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC018628.1-201ENST00000624147 3819 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC092376.2-201ENST00000622621 4116 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 OR56A4-201ENST00000330728 1209 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 U6.112-201ENST00000384129 70 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 SNORD116-2-201ENST00000384274 95 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 SNORD116-6-201ENST00000384711 96 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 ATP5F1P2-201ENST00000398143 760 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 LRRC37BP1-201ENST00000398851 714 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 RPL7P27-201ENST00000403775 720 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 MTCO3P4-201ENST00000419236 787 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 GTF2IP3-201ENST00000433887 494 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 Z84478.1-201ENST00000438230 1219 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 SUMO2P3-201ENST00000438311 288 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC092647.3-201ENST00000443044 633 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC016772.1-201ENST00000444170 1261 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 PTGES3P5-201ENST00000455109 434 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC092754.1-201ENST00000472975 479 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 RPL15P21-201ENST00000495592 567 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC025459.1-201ENST00000504072 156 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC027369.5-201ENST00000533838 755 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AP004607.2-201ENST00000533949 322 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC134669.1-201ENST00000581275 672 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 MIR4660-201ENST00000583549 74 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC025588.2-201ENST00000604851 466 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms