Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 MAPK10-304ENST00000641341 3984 ntBASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 HSPD1P11-201ENST00000508643 1702 ntBASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 RNU6-1331P-201ENST00000363658 106 ntBASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 SNORA66-201ENST00000384792 133 ntBASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 MIR323B-201ENST00000385269 82 ntBASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 MIR143-201ENST00000385300 106 ntBASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 MT-RNR1-201ENST00000389680 954 ntBASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 MTCO1P51-201ENST00000427672 1060 ntBASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 AURKAPS1-201ENST00000451805 1212 ntBASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 RPS18P6-201ENST00000476880 458 ntBASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 RPS21P4-201ENST00000487122 248 ntBASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 AC104687.2-201ENST00000604442 342 ntBASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 AL512329.2-201ENST00000607350 548 ntBASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 AC008115.4-201ENST00000619780 775 ntBASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 MAPK10-320ENST00000641462 6696 ntBASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AL136131.1-201ENST00000406079 803 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AL512422.1-201ENST00000407033 553 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 RPL36AP10-201ENST00000421785 322 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 RPS26P47-201ENST00000427219 348 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 RPS26P4-201ENST00000431743 355 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 RHOT1P3-201ENST00000436571 331 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 FHP1-201ENST00000442741 703 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AL606490.1-201ENST00000452266 765 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 HMGN2P25-201ENST00000486956 268 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 RN7SL101P-201ENST00000496350 279 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AC072052.1-201ENST00000496556 306 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AC111000.5-201ENST00000506559 1178 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AC022882.1-201ENST00000532142 501 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 HMGB3P26-201ENST00000560051 582 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AC005377.1-201ENST00000605126 456 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AP000864.1-201ENST00000609424 650 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AL049794.2-201ENST00000616301 365 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AC019206.1-201ENST00000621938 425 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AC087821.1-201ENST00000623639 567 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AL034370.1-201ENST00000397254 1590 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 AL672167.1-203ENST00000641299 2975 ntBASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLHC1Q8NHS4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.71□□□□□ -1.65
CLHC1Q8NHS4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.71□□□□□ -1.65
CLHC1Q8NHS4 OR14L1P-202ENST00000641545 3009 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms