Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 CKS1BP6-201ENST00000424932 240 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 AC092162.1-201ENST00000432828 434 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 TXNP5-201ENST00000441043 315 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 NDUFA5P8-201ENST00000449019 346 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 BUD31P2-201ENST00000449374 300 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 CCRL1P1-201ENST00000449542 1053 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 OTX2P1-201ENST00000450956 354 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 AC073476.1-201ENST00000452854 407 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 AL445433.1-201ENST00000457507 257 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 AL133445.1-201ENST00000467051 452 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 AC067904.2-201ENST00000517322 1283 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 OR1F2P-201ENST00000570470 933 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 AC067773.1-201ENST00000603284 1094 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 HMGB1P51-201ENST00000605166 638 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 U3.3-201ENST00000362986 216 ntBASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 RNA5SP335-201ENST00000363817 110 ntBASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 RNU1-149P-201ENST00000390870 161 ntBASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AC110602.1-201ENST00000437414 318 ntBASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AL157884.3-201ENST00000448273 1184 ntBASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AC108751.2-201ENST00000469993 231 ntBASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AP002884.1-201ENST00000479691 655 ntBASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 LARP7P4-201ENST00000481075 878 ntBASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AC109635.6-201ENST00000525487 1113 ntBASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AC107958.1-201ENST00000556576 290 ntBASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AC092868.3-201ENST00000560515 784 ntBASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AC010547.6-201ENST00000571789 193 ntBASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 BX322635.1-201ENST00000605804 496 ntBASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AC020763.5-201ENST00000623298 430 ntBASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AL139254.3-201ENST00000641097 674 ntBASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AL133268.1-201ENST00000405676 1401 ntBASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 AL451142.2-201ENST00000429076 2090 ntBASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CCDC71LQ8N9Z2 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC71LQ8N9Z2 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC71LQ8N9Z2 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC71LQ8N9Z2 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC71LQ8N9Z2 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC71LQ8N9Z2 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms