Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 AC002504.1-201ENST00000438281 691 ntBASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 MTCYBP21-201ENST00000443300 1113 ntBASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 AC073909.1-201ENST00000447112 999 ntBASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 EXOSC3P1-201ENST00000448649 500 ntBASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 RPL7P55-201ENST00000450522 746 ntBASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 AC094085.1-201ENST00000468914 584 ntBASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 AC008410.1-201ENST00000483777 339 ntBASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 OR5H3P-201ENST00000502817 919 ntBASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 MTND6P2-201ENST00000512226 524 ntBASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 RN7SKP70-201ENST00000516655 271 ntBASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 CDC42P3-201ENST00000518493 633 ntBASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 NRBF2P4-201ENST00000520874 850 ntBASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 AC090888.2-201ENST00000559765 1144 ntBASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 AF230666.2-201ENST00000602328 725 ntBASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 RPP40P2-201ENST00000603596 712 ntBASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 ELOCP35-201ENST00000604289 336 ntBASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 CYCSP41-201ENST00000616920 296 ntBASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 AL672167.1-204ENST00000641875 3017 ntBASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLIP4Q8N3C7 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AC004817.4-201ENST00000602396 3625 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 ZNF29P-201ENST00000225587 168 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 OR2AT2P-201ENST00000413438 905 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 MTND2P16-201ENST00000419987 799 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 PTP4A1P7-201ENST00000423476 514 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 RPL19P16-201ENST00000433839 588 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AC016772.1-201ENST00000444170 1261 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AC073109.1-201ENST00000445066 978 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AL627224.1-201ENST00000448334 444 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 HMGB1P26-201ENST00000452520 628 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 RPL23AP23-201ENST00000452590 471 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 MTCO2P6-201ENST00000463134 685 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AC084754.1-201ENST00000463466 464 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AC021660.1-201ENST00000465006 554 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AC092754.1-201ENST00000472975 479 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AC007998.1-201ENST00000474156 672 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AC008427.1-201ENST00000503102 655 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AC021087.2-201ENST00000504656 1203 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AP004607.2-201ENST00000533949 322 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AC010547.6-201ENST00000571789 193 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AL606834.3-201ENST00000602615 496 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AC079880.2-201ENST00000603790 1213 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 OR7A19P-201ENST00000608051 733 ntBASIC4.97□□□□□ -1.61
CLIP4Q8N3C7 AC021851.1-201ENST00000608537 1082 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms