Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 AC011493.1-201ENST00000596753 1632 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 RAD1P1-201ENST00000231383 813 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 RNU1-43P-201ENST00000365052 165 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 MIR765-201ENST00000390226 114 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 RNU1-149P-201ENST00000390870 161 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 CHMP1B2P-201ENST00000399581 597 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 COX5BP7-201ENST00000414780 274 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 AC007000.2-201ENST00000442564 487 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 AL354710.1-201ENST00000453641 246 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 AC245028.2-201ENST00000458673 253 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 CABYRP1-201ENST00000465493 1045 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 AP000797.2-201ENST00000475768 606 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 AC004453.1-201ENST00000487895 408 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 NDUFA5P12-201ENST00000503796 343 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 MYL12BP2-201ENST00000503948 512 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 MTND2P31-201ENST00000512602 616 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 AC108471.1-201ENST00000513977 287 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 YWHABP2-201ENST00000540201 713 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 LSM3P2-201ENST00000551246 273 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 AL049870.4-201ENST00000555741 486 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 AC040958.1-201ENST00000561102 201 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 AC124856.1-201ENST00000600819 896 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 AC009163.6-201ENST00000612367 342 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 AL122125.1-201ENST00000616999 600 ntBASIC5.42□□□□□ -1.54
PRPF39Q86UA1 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF39Q86UA1 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 AC073429.2-201ENST00000569694 1444 ntBASIC5.41□□□□□ -1.54
PRPF39Q86UA1 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 U8.4-201ENST00000363626 134 ntBASIC5.41□□□□□ -1.54
PRPF39Q86UA1 AC007618.1-201ENST00000366455 732 ntBASIC5.41□□□□□ -1.54
PRPF39Q86UA1 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 RNA5SP487-201ENST00000410186 122 ntBASIC5.41□□□□□ -1.54
PRPF39Q86UA1 DPY19L1P2-201ENST00000426647 915 ntBASIC5.41□□□□□ -1.54
PRPF39Q86UA1 NPM1P22-201ENST00000427761 952 ntBASIC5.41□□□□□ -1.54
PRPF39Q86UA1 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 AL591363.1-201ENST00000450091 483 ntBASIC5.41□□□□□ -1.54
PRPF39Q86UA1 RPL7AP6-201ENST00000477943 801 ntBASIC5.41□□□□□ -1.54
PRPF39Q86UA1 AC093270.2-201ENST00000486157 792 ntBASIC5.41□□□□□ -1.54
PRPF39Q86UA1 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 SNRPCP2-201ENST00000504370 475 ntBASIC5.41□□□□□ -1.54
PRPF39Q86UA1 RNU6-941P-201ENST00000516346 108 ntBASIC5.41□□□□□ -1.54
PRPF39Q86UA1 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 BNIP3P32-201ENST00000600015 554 ntBASIC5.41□□□□□ -1.54
PRPF39Q86UA1 AC009027.1-201ENST00000604510 479 ntBASIC5.41□□□□□ -1.54
PRPF39Q86UA1 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 SAMMSON-213ENST00000641336 1521 ntBASIC5.41□□□□□ -1.54
PRPF39Q86UA1 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 Z95331.1-201ENST00000623075 23112 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms