Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 Z80107.2-201ENST00000445127 392 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 AL591363.1-201ENST00000450091 483 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 AL691482.1-201ENST00000453255 87 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 AC091685.2-201ENST00000454924 864 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 RPS17P2-201ENST00000461663 408 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 AC021660.1-201ENST00000465006 554 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 AC092324.1-201ENST00000468671 324 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 AC083982.1-201ENST00000485679 344 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 GAPDHP56-201ENST00000506031 988 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.91□□□□□ -1.46
CTR9Q6PD62 AC022882.1-201ENST00000532142 501 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
CTR9Q6PD62 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.91□□□□□ -1.46
CTR9Q6PD62 RN7SL435P-201ENST00000584418 282 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.91□□□□□ -1.46
CTR9Q6PD62 AL031320.1-201ENST00000604177 357 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 AC018695.5-201ENST00000605872 315 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 AC100827.5-201ENST00000615883 426 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 AC002044.3-201ENST00000623314 541 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.91□□□□□ -1.46
CTR9Q6PD62 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.91□□□□□ -1.46
CTR9Q6PD62 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
CTR9Q6PD62 AC132825.1-201ENST00000463573 2247 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTR9Q6PD62 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.91□□□□□ -1.46
CTR9Q6PD62 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTR9Q6PD62 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.91□□□□□ -1.46
CTR9Q6PD62 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTR9Q6PD62 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTR9Q6PD62 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CTR9Q6PD62 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CTR9Q6PD62 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.9□□□□□ -1.46
CTR9Q6PD62 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CTR9Q6PD62 Z95327.2-201ENST00000414579 1873 ntBASIC5.9□□□□□ -1.46
CTR9Q6PD62 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.9□□□□□ -1.46
CTR9Q6PD62 ECM1P2-201ENST00000503354 1577 ntBASIC5.9□□□□□ -1.46
CTR9Q6PD62 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.9□□□□□ -1.46
CTR9Q6PD62 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CTR9Q6PD62 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
CTR9Q6PD62 AL021331.1-201ENST00000402817 582 ntBASIC5.9□□□□□ -1.46
CTR9Q6PD62 AL358176.3-201ENST00000420757 454 ntBASIC5.9□□□□□ -1.46
CTR9Q6PD62 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.9□□□□□ -1.46
CTR9Q6PD62 AC008072.1-201ENST00000434254 824 ntBASIC5.9□□□□□ -1.46
CTR9Q6PD62 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.9□□□□□ -1.46
CTR9Q6PD62 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.9□□□□□ -1.46
CTR9Q6PD62 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.9□□□□□ -1.46
CTR9Q6PD62 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CTR9Q6PD62 OR52J1P-201ENST00000450596 932 ntBASIC5.9□□□□□ -1.46
CTR9Q6PD62 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.9□□□□□ -1.46
CTR9Q6PD62 RPS6P2-201ENST00000454208 705 ntBASIC5.9□□□□□ -1.46
CTR9Q6PD62 RPL23AP56-201ENST00000460778 453 ntBASIC5.9□□□□□ -1.46
CTR9Q6PD62 RPL7AP10-201ENST00000481016 791 ntBASIC5.9□□□□□ -1.46
CTR9Q6PD62 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.9□□□□□ -1.46
CTR9Q6PD62 AC008676.3-201ENST00000521237 435 ntBASIC5.9□□□□□ -1.46
CTR9Q6PD62 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.9□□□□□ -1.46
CTR9Q6PD62 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.9□□□□□ -1.46
CTR9Q6PD62 BGLT3-201ENST00000564523 994 ntBASIC5.9□□□□□ -1.46
CTR9Q6PD62 AC022106.2-201ENST00000620114 757 ntBASIC5.9□□□□□ -1.46
CTR9Q6PD62 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.9□□□□□ -1.46
CTR9Q6PD62 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.9□□□□□ -1.47
CTR9Q6PD62 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.9□□□□□ -1.47
CTR9Q6PD62 AC022417.1-201ENST00000624768 1303 ntBASIC5.9□□□□□ -1.47
CTR9Q6PD62 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.9□□□□□ -1.47
CTR9Q6PD62 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.9□□□□□ -1.47
CTR9Q6PD62 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CTR9Q6PD62 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CTR9Q6PD62 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTR9Q6PD62 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CTR9Q6PD62 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTR9Q6PD62 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CTR9Q6PD62 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CTR9Q6PD62 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CTR9Q6PD62 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CTR9Q6PD62 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.89□□□□□ -1.47
CTR9Q6PD62 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
CTR9Q6PD62 RN7SKP103-201ENST00000363848 320 ntBASIC5.89□□□□□ -1.47
CTR9Q6PD62 AC013442.1-201ENST00000397347 228 ntBASIC5.89□□□□□ -1.47
CTR9Q6PD62 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.89□□□□□ -1.47
CTR9Q6PD62 AL139128.1-201ENST00000413921 941 ntBASIC5.89□□□□□ -1.47
CTR9Q6PD62 GTF2IP5-201ENST00000414608 731 ntBASIC5.89□□□□□ -1.47
CTR9Q6PD62 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTR9Q6PD62 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.89□□□□□ -1.47
CTR9Q6PD62 SCAND3P1-201ENST00000439854 1060 ntBASIC5.89□□□□□ -1.47
CTR9Q6PD62 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.89□□□□□ -1.47
CTR9Q6PD62 AL157385.1-201ENST00000446973 268 ntBASIC5.89□□□□□ -1.47
CTR9Q6PD62 OR7H2P-201ENST00000513483 306 ntBASIC5.89□□□□□ -1.47
CTR9Q6PD62 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.89□□□□□ -1.47
CTR9Q6PD62 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.89□□□□□ -1.47
CTR9Q6PD62 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.89□□□□□ -1.47
CTR9Q6PD62 EDDM3DP-201ENST00000554692 434 ntBASIC5.89□□□□□ -1.47
CTR9Q6PD62 AC020910.3-201ENST00000603701 874 ntBASIC5.89□□□□□ -1.47
CTR9Q6PD62 AL008729.2-201ENST00000606393 473 ntBASIC5.89□□□□□ -1.47
CTR9Q6PD62 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.89□□□□□ -1.47
CTR9Q6PD62 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.89□□□□□ -1.47
CTR9Q6PD62 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CTR9Q6PD62 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CTR9Q6PD62 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTR9Q6PD62 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTR9Q6PD62 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.89□□□□□ -1.47
CTR9Q6PD62 STX3-208ENST00000641815 3236 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms