Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.18□□□□□ -1.58
ZNF549Q6P9A3 AC079298.2-201ENST00000623885 459 ntBASIC5.18□□□□□ -1.58
ZNF549Q6P9A3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ZNF549Q6P9A3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.18□□□□□ -1.58
ZNF549Q6P9A3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
ZNF549Q6P9A3 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.18□□□□□ -1.58
ZNF549Q6P9A3 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ZNF549Q6P9A3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
ZNF549Q6P9A3 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
ZNF549Q6P9A3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ZNF549Q6P9A3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ZNF549Q6P9A3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ZNF549Q6P9A3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
ZNF549Q6P9A3 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AL450345.1-202ENST00000605741 3881 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 RNA5SP90-201ENST00000364801 99 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 MIR421-201ENST00000365696 85 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 RNU1-74P-201ENST00000384108 171 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 MTCO2P31-201ENST00000402702 684 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 RPL35AP24-201ENST00000413846 330 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 LUZP4P1-201ENST00000415420 344 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 EI24P4-201ENST00000423683 1078 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC115285.1-201ENST00000424879 736 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 MTND5P25-201ENST00000430499 799 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 MTND2P5-201ENST00000432656 1006 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 TCEA1P3-201ENST00000443005 880 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 EXOSC3P1-201ENST00000448649 500 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 SNORD11.1-201ENST00000459482 85 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AL133445.1-201ENST00000467051 452 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC104629.2-201ENST00000468627 598 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 NDUFA5P9-201ENST00000472609 340 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 RPL7P40-201ENST00000481703 745 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 COX6B1P2-201ENST00000489624 230 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC015864.1-201ENST00000496512 544 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 MYL12BP2-201ENST00000503948 512 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC112184.1-201ENST00000505179 312 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 RNU6-889P-201ENST00000517189 103 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 IGKV3D-34-201ENST00000522638 302 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC118942.1-201ENST00000529674 1035 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC127381.1-201ENST00000555979 939 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AGGF1P9-201ENST00000561884 913 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 MTCYBP28-201ENST00000566728 1132 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC005951.1-201ENST00000576706 485 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC127024.5-201ENST00000580085 462 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AL583832.1-201ENST00000603227 784 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AL133247.2-201ENST00000603236 482 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AL451086.1-201ENST00000605596 223 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC080013.6-201ENST00000606185 215 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC096586.2-201ENST00000610260 441 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC109309.2-201ENST00000612597 332 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AC132825.7-201ENST00000638744 335 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 AL022322.2-201ENST00000624072 20397 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZNF549Q6P9A3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AC073136.1-201ENST00000449426 2884 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms