Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 AL513533.1-201ENST00000453728 415 ntBASIC5.15□□□□□ -1.59
GTF2BQ00403 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.15□□□□□ -1.59
GTF2BQ00403 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
GTF2BQ00403 RPL36AP41-201ENST00000493820 306 ntBASIC5.15□□□□□ -1.59
GTF2BQ00403 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
GTF2BQ00403 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.15□□□□□ -1.59
GTF2BQ00403 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.15□□□□□ -1.59
GTF2BQ00403 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.15□□□□□ -1.59
GTF2BQ00403 OR5M2P-201ENST00000529003 936 ntBASIC5.15□□□□□ -1.59
GTF2BQ00403 MIR4270-201ENST00000581799 70 ntBASIC5.15□□□□□ -1.59
GTF2BQ00403 RN7SL690P-201ENST00000582087 240 ntBASIC5.15□□□□□ -1.59
GTF2BQ00403 RN7SL435P-201ENST00000584418 282 ntBASIC5.15□□□□□ -1.59
GTF2BQ00403 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.15□□□□□ -1.59
GTF2BQ00403 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.15□□□□□ -1.59
GTF2BQ00403 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
GTF2BQ00403 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
GTF2BQ00403 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
GTF2BQ00403 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
GTF2BQ00403 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
GTF2BQ00403 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GTF2BQ00403 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
GTF2BQ00403 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.14□□□□□ -1.59
GTF2BQ00403 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GTF2BQ00403 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GTF2BQ00403 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GTF2BQ00403 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
GTF2BQ00403 RNU1-83P-201ENST00000363426 164 ntBASIC5.14□□□□□ -1.59
GTF2BQ00403 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
GTF2BQ00403 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
GTF2BQ00403 MIR298-201ENST00000401212 88 ntBASIC5.14□□□□□ -1.59
GTF2BQ00403 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.14□□□□□ -1.59
GTF2BQ00403 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.14□□□□□ -1.59
GTF2BQ00403 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.14□□□□□ -1.59
GTF2BQ00403 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.14□□□□□ -1.59
GTF2BQ00403 AL772161.1-201ENST00000439130 476 ntBASIC5.14□□□□□ -1.59
GTF2BQ00403 AL161722.1-201ENST00000446972 1032 ntBASIC5.14□□□□□ -1.59
GTF2BQ00403 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.14□□□□□ -1.59
GTF2BQ00403 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.14□□□□□ -1.59
GTF2BQ00403 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.14□□□□□ -1.59
GTF2BQ00403 AC006967.1-201ENST00000467608 589 ntBASIC5.14□□□□□ -1.59
GTF2BQ00403 AC069304.1-201ENST00000491593 704 ntBASIC5.14□□□□□ -1.59
GTF2BQ00403 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.14□□□□□ -1.59
GTF2BQ00403 AC068993.1-201ENST00000546724 589 ntBASIC5.14□□□□□ -1.59
GTF2BQ00403 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.14□□□□□ -1.59
GTF2BQ00403 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.14□□□□□ -1.59
GTF2BQ00403 BNIP3P32-201ENST00000600015 554 ntBASIC5.14□□□□□ -1.59
GTF2BQ00403 AC004948.1-201ENST00000609858 672 ntBASIC5.14□□□□□ -1.59
GTF2BQ00403 MIR6780A-201ENST00000615089 68 ntBASIC5.14□□□□□ -1.59
GTF2BQ00403 AC100827.5-201ENST00000615883 426 ntBASIC5.14□□□□□ -1.59
GTF2BQ00403 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.14□□□□□ -1.59
GTF2BQ00403 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GTF2BQ00403 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GTF2BQ00403 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GTF2BQ00403 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
GTF2BQ00403 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.14□□□□□ -1.59
GTF2BQ00403 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
GTF2BQ00403 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.14□□□□□ -1.59
GTF2BQ00403 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GTF2BQ00403 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GTF2BQ00403 MAPK10-263ENST00000641052 4307 ntBASIC5.14□□□□□ -1.59
GTF2BQ00403 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GTF2BQ00403 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.13□□□□□ -1.59
GTF2BQ00403 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
GTF2BQ00403 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
GTF2BQ00403 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GTF2BQ00403 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GTF2BQ00403 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
GTF2BQ00403 RPL36AP10-201ENST00000421785 322 ntBASIC5.13□□□□□ -1.59
GTF2BQ00403 AC010326.1-201ENST00000462726 602 ntBASIC5.13□□□□□ -1.59
GTF2BQ00403 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.13□□□□□ -1.59
GTF2BQ00403 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.13□□□□□ -1.59
GTF2BQ00403 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
GTF2BQ00403 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.13□□□□□ -1.59
GTF2BQ00403 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.13□□□□□ -1.59
GTF2BQ00403 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GTF2BQ00403 AC125612.1-201ENST00000547580 377 ntBASIC5.13□□□□□ -1.59
GTF2BQ00403 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.13□□□□□ -1.59
GTF2BQ00403 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.13□□□□□ -1.59
GTF2BQ00403 OR7A19P-201ENST00000608051 733 ntBASIC5.13□□□□□ -1.59
GTF2BQ00403 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.13□□□□□ -1.59
GTF2BQ00403 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GTF2BQ00403 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GTF2BQ00403 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.13□□□□□ -1.59
GTF2BQ00403 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
GTF2BQ00403 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.13□□□□□ -1.59
GTF2BQ00403 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GTF2BQ00403 MTND5P12-201ENST00000502851 1449 ntBASIC5.13□□□□□ -1.59
GTF2BQ00403 AC135352.1-201ENST00000506173 1418 ntBASIC5.13□□□□□ -1.59
GTF2BQ00403 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
GTF2BQ00403 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.13□□□□□ -1.59
GTF2BQ00403 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
GTF2BQ00403 AC125257.1-201ENST00000560400 2930 ntBASIC5.13□□□□□ -1.59
GTF2BQ00403 KARSP3-201ENST00000571212 1504 ntBASIC5.13□□□□□ -1.59
GTF2BQ00403 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GTF2BQ00403 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.12□□□□□ -1.59
GTF2BQ00403 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
GTF2BQ00403 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GTF2BQ00403 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
GTF2BQ00403 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
GTF2BQ00403 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms