Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 TMEM30CP-203ENST00000637814 1035 ntBASIC4.37□□□□□ -1.71
H3F3AP84243 CASC19-222ENST00000641321 1173 ntBASIC4.37□□□□□ -1.71
H3F3AP84243 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
H3F3AP84243 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
H3F3AP84243 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.37□□□□□ -1.71
H3F3AP84243 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
H3F3AP84243 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
H3F3AP84243 AC112255.1-201ENST00000624070 2493 ntBASIC4.37□□□□□ -1.71
H3F3AP84243 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
H3F3AP84243 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
H3F3AP84243 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.37□□□□□ -1.71
H3F3AP84243 AC093909.5-201ENST00000621839 1799 ntBASIC4.37□□□□□ -1.71
H3F3AP84243 AL672167.1-204ENST00000641875 3017 ntBASIC4.37□□□□□ -1.71
H3F3AP84243 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
H3F3AP84243 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
H3F3AP84243 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.36□□□□□ -1.71
H3F3AP84243 VDAC2P1-201ENST00000399358 958 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 AC233289.1-201ENST00000403700 508 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 RN7SKP125-201ENST00000410481 302 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.36□□□□□ -1.71
H3F3AP84243 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.36□□□□□ -1.71
H3F3AP84243 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.36□□□□□ -1.71
H3F3AP84243 AC112498.1-201ENST00000444401 332 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 AL031584.1-201ENST00000447169 754 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 RPL31P44-201ENST00000447680 377 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.36□□□□□ -1.71
H3F3AP84243 SLC25A18P1-201ENST00000449385 454 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 AC002553.2-201ENST00000453217 340 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 AC022795.1-201ENST00000473808 480 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 RPL7P16-201ENST00000479738 738 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 RPL7AP10-201ENST00000481016 791 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.36□□□□□ -1.71
H3F3AP84243 RN7SL558P-201ENST00000497468 299 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
H3F3AP84243 BTF3P13-201ENST00000513224 490 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.36□□□□□ -1.71
H3F3AP84243 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.36□□□□□ -1.71
H3F3AP84243 EDDM3DP-201ENST00000554692 434 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 AC018552.1-201ENST00000562099 811 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.36□□□□□ -1.71
H3F3AP84243 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.36□□□□□ -1.71
H3F3AP84243 AP002884.5-201ENST00000595053 1132 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.36□□□□□ -1.71
H3F3AP84243 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.36□□□□□ -1.71
H3F3AP84243 AC006453.5-201ENST00000636451 619 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
H3F3AP84243 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
H3F3AP84243 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.36□□□□□ -1.71
H3F3AP84243 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
H3F3AP84243 NAMPTP1-201ENST00000440465 2514 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 AC009643.2-201ENST00000603543 1448 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
H3F3AP84243 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.36□□□□□ -1.71
H3F3AP84243 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
H3F3AP84243 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.36□□□□□ -1.71
H3F3AP84243 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.36□□□□□ -1.71
H3F3AP84243 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
H3F3AP84243 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
H3F3AP84243 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.35□□□□□ -1.71
H3F3AP84243 AC000123.3-201ENST00000624029 4975 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
H3F3AP84243 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
H3F3AP84243 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
H3F3AP84243 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
H3F3AP84243 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
H3F3AP84243 AC007068.1-201ENST00000396690 844 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 AL645733.1-201ENST00000402250 217 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.35□□□□□ -1.71
H3F3AP84243 AC114755.2-201ENST00000413520 361 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 RPS26P13-201ENST00000419030 330 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 OR5M12P-201ENST00000423388 929 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.35□□□□□ -1.71
H3F3AP84243 AURKAPS2-201ENST00000454983 333 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 AC008410.1-201ENST00000483777 339 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 NDUFA5P12-201ENST00000503796 343 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 NDUFB5P1-201ENST00000508134 564 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.35□□□□□ -1.71
H3F3AP84243 RPS27AP18-201ENST00000515536 459 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 MORF4L1P3-201ENST00000525966 950 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.35□□□□□ -1.71
H3F3AP84243 AC021006.3-201ENST00000530771 192 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.35□□□□□ -1.71
H3F3AP84243 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.35□□□□□ -1.71
H3F3AP84243 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
H3F3AP84243 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.35□□□□□ -1.71
H3F3AP84243 BGLT3-201ENST00000564523 994 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 SNORA74C-1-201ENST00000580726 201 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.35□□□□□ -1.71
H3F3AP84243 AL121932.1-201ENST00000605542 214 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 AC090510.2-201ENST00000617465 629 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.35□□□□□ -1.71
H3F3AP84243 AL022401.1-201ENST00000619498 108 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 AC087385.3-201ENST00000620477 187 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.35□□□□□ -1.71
H3F3AP84243 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
H3F3AP84243 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.35□□□□□ -1.71
H3F3AP84243 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
H3F3AP84243 AC131971.1-201ENST00000332881 1482 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 AC126323.6-202ENST00000568092 3511 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms