Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 MAPK10-383ENST00000642032 3390 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA1P56159 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
GFRA1P56159 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
GFRA1P56159 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
GFRA1P56159 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
GFRA1P56159 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA1P56159 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA1P56159 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.85□□□□□ -1.47
GFRA1P56159 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
GFRA1P56159 AL021877.2-201ENST00000624442 10684 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
GFRA1P56159 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA1P56159 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.85□□□□□ -1.47
GFRA1P56159 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA1P56159 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA1P56159 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
GFRA1P56159 AC103591.2-201ENST00000265259 766 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 AL512646.1-201ENST00000269395 1077 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA1P56159 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
GFRA1P56159 RNU6-115P-201ENST00000364310 107 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
GFRA1P56159 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
GFRA1P56159 RNU6-1151P-201ENST00000384684 107 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 MTCO3P31-201ENST00000405526 789 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 AC099535.1-201ENST00000408928 371 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.85□□□□□ -1.47
GFRA1P56159 RN7SKP56-201ENST00000410513 331 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.85□□□□□ -1.47
GFRA1P56159 RPL21P50-201ENST00000417698 477 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 RPL36P18-201ENST00000419316 318 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 RPL21P32-201ENST00000419877 477 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC5.85□□□□□ -1.47
GFRA1P56159 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA1P56159 AL035551.1-201ENST00000446931 348 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 AC097359.1-201ENST00000447946 463 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA1P56159 PDCL3P4-201ENST00000489621 720 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA1P56159 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.85□□□□□ -1.47
GFRA1P56159 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.85□□□□□ -1.47
GFRA1P56159 AC091874.2-201ENST00000505889 720 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.85□□□□□ -1.47
GFRA1P56159 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
GFRA1P56159 HMGN1P16-201ENST00000508308 283 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.85□□□□□ -1.47
GFRA1P56159 SNORA48.10-201ENST00000516965 160 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.85□□□□□ -1.47
GFRA1P56159 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.85□□□□□ -1.47
GFRA1P56159 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.85□□□□□ -1.47
GFRA1P56159 IGLV3-6-201ENST00000523937 250 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.85□□□□□ -1.47
GFRA1P56159 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.85□□□□□ -1.47
GFRA1P56159 AP002453.2-201ENST00000533503 320 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.85□□□□□ -1.47
GFRA1P56159 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.85□□□□□ -1.47
GFRA1P56159 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
GFRA1P56159 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.85□□□□□ -1.47
GFRA1P56159 AC023310.2-201ENST00000553844 547 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 OR11J2P-201ENST00000555298 907 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 AC244034.2-201ENST00000562504 509 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 AC107214.2-201ENST00000608204 634 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 AL354760.1-201ENST00000608357 643 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 uc_338.29-201ENST00000615099 168 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 AC018816.2-201ENST00000621460 353 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.85□□□□□ -1.47
GFRA1P56159 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC5.85□□□□□ -1.47
GFRA1P56159 AC010325.3-201ENST00000641084 394 ntBASIC5.85□□□□□ -1.47
GFRA1P56159 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA1P56159 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.85□□□□□ -1.47
GFRA1P56159 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.85□□□□□ -1.47
GFRA1P56159 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.85□□□□□ -1.47
GFRA1P56159 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA1P56159 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA1P56159 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
GFRA1P56159 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA1P56159 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA1P56159 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA1P56159 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA1P56159 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA1P56159 AL590763.1-201ENST00000398297 1545 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA1P56159 TEX21P-201ENST00000447107 1476 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.84□□□□□ -1.47
GFRA1P56159 AC114786.1-201ENST00000512892 1415 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC5.84□□□□□ -1.47
GFRA1P56159 AL136531.3-201ENST00000624378 3658 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA1P56159 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
GFRA1P56159 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.84□□□□□ -1.47
GFRA1P56159 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA1P56159 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA1P56159 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.84□□□□□ -1.47
GFRA1P56159 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA1P56159 RN7SKP171-201ENST00000364417 303 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 RNA5SP77-201ENST00000365394 120 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms