Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 FO393419.3-201ENST00000428741 282 ntBASIC5.75□□□□□ -1.49
COPAP53621 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.75□□□□□ -1.49
COPAP53621 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COPAP53621 AC096775.1-201ENST00000437724 448 ntBASIC5.75□□□□□ -1.49
COPAP53621 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.75□□□□□ -1.49
COPAP53621 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.75□□□□□ -1.49
COPAP53621 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.75□□□□□ -1.49
COPAP53621 RNU1-88P-201ENST00000459274 128 ntBASIC5.75□□□□□ -1.49
COPAP53621 RN7SL515P-201ENST00000463999 297 ntBASIC5.75□□□□□ -1.49
COPAP53621 AC100832.1-201ENST00000471945 383 ntBASIC5.75□□□□□ -1.49
COPAP53621 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.75□□□□□ -1.49
COPAP53621 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.75□□□□□ -1.49
COPAP53621 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.75□□□□□ -1.49
COPAP53621 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.75□□□□□ -1.49
COPAP53621 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.75□□□□□ -1.49
COPAP53621 RBM22P12-201ENST00000567098 1255 ntBASIC5.75□□□□□ -1.49
COPAP53621 AC015720.2-201ENST00000567709 334 ntBASIC5.75□□□□□ -1.49
COPAP53621 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.75□□□□□ -1.49
COPAP53621 MIR1269B-201ENST00000580405 75 ntBASIC5.75□□□□□ -1.49
COPAP53621 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.75□□□□□ -1.49
COPAP53621 AC006272.2-201ENST00000594725 163 ntBASIC5.75□□□□□ -1.49
COPAP53621 AC119501.1-201ENST00000603646 475 ntBASIC5.75□□□□□ -1.49
COPAP53621 NANOGP3-201ENST00000605855 286 ntBASIC5.75□□□□□ -1.49
COPAP53621 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.75□□□□□ -1.49
COPAP53621 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.75□□□□□ -1.49
COPAP53621 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
COPAP53621 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.75□□□□□ -1.49
COPAP53621 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.75□□□□□ -1.49
COPAP53621 OR9K1P-202ENST00000641111 3217 ntBASIC5.75□□□□□ -1.49
COPAP53621 NXF4-202ENST00000416098 1465 ntBASIC5.75□□□□□ -1.49
COPAP53621 MT-RNR2-201ENST00000387347 1559 ntBASIC5.75□□□□□ -1.49
COPAP53621 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
COPAP53621 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
COPAP53621 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.75□□□□□ -1.49
COPAP53621 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COPAP53621 AC004158.1-201ENST00000564508 4319 ntBASIC5.75□□□□□ -1.49
COPAP53621 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COPAP53621 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
COPAP53621 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
COPAP53621 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COPAP53621 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COPAP53621 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COPAP53621 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
COPAP53621 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
COPAP53621 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.74□□□□□ -1.49
COPAP53621 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COPAP53621 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COPAP53621 GAPDHP42-201ENST00000406848 981 ntBASIC5.74□□□□□ -1.49
COPAP53621 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.74□□□□□ -1.49
COPAP53621 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.74□□□□□ -1.49
COPAP53621 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.74□□□□□ -1.49
COPAP53621 AC092447.2-201ENST00000435487 669 ntBASIC5.74□□□□□ -1.49
COPAP53621 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.74□□□□□ -1.49
COPAP53621 ARF4P4-201ENST00000439608 520 ntBASIC5.74□□□□□ -1.49
COPAP53621 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.74□□□□□ -1.49
COPAP53621 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.74□□□□□ -1.49
COPAP53621 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
COPAP53621 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.74□□□□□ -1.49
COPAP53621 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.74□□□□□ -1.49
COPAP53621 TPT1P1-201ENST00000458495 518 ntBASIC5.74□□□□□ -1.49
COPAP53621 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COPAP53621 AC006539.1-201ENST00000481419 501 ntBASIC5.74□□□□□ -1.49
COPAP53621 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.74□□□□□ -1.49
COPAP53621 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.74□□□□□ -1.49
COPAP53621 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.74□□□□□ -1.49
COPAP53621 RNU6-276P-201ENST00000516114 96 ntBASIC5.74□□□□□ -1.49
COPAP53621 IGLV2-28-201ENST00000520681 304 ntBASIC5.74□□□□□ -1.49
COPAP53621 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.74□□□□□ -1.49
COPAP53621 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.74□□□□□ -1.49
COPAP53621 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.74□□□□□ -1.49
COPAP53621 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.74□□□□□ -1.49
COPAP53621 AL049830.4-201ENST00000555149 351 ntBASIC5.74□□□□□ -1.49
COPAP53621 MRPS21P7-201ENST00000566937 238 ntBASIC5.74□□□□□ -1.49
COPAP53621 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.74□□□□□ -1.49
COPAP53621 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.74□□□□□ -1.49
COPAP53621 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.74□□□□□ -1.49
COPAP53621 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.74□□□□□ -1.49
COPAP53621 MTCO2P2-201ENST00000591258 225 ntBASIC5.74□□□□□ -1.49
COPAP53621 FKBP1AP1-201ENST00000594588 318 ntBASIC5.74□□□□□ -1.49
COPAP53621 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.74□□□□□ -1.49
COPAP53621 AL357094.1-201ENST00000603845 844 ntBASIC5.74□□□□□ -1.49
COPAP53621 AL445435.1-201ENST00000604232 665 ntBASIC5.74□□□□□ -1.49
COPAP53621 AC018618.2-201ENST00000604770 446 ntBASIC5.74□□□□□ -1.49
COPAP53621 AC079610.2-201ENST00000604818 690 ntBASIC5.74□□□□□ -1.49
COPAP53621 AC010245.2-201ENST00000606908 1167 ntBASIC5.74□□□□□ -1.49
COPAP53621 AC006946.3-201ENST00000609791 756 ntBASIC5.74□□□□□ -1.49
COPAP53621 AC140725.3-201ENST00000616193 880 ntBASIC5.74□□□□□ -1.49
COPAP53621 AL669942.2-201ENST00000620352 697 ntBASIC5.74□□□□□ -1.49
COPAP53621 MIR8080-201ENST00000622224 89 ntBASIC5.74□□□□□ -1.49
COPAP53621 AC010435.1-201ENST00000623353 1177 ntBASIC5.74□□□□□ -1.49
COPAP53621 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.74□□□□□ -1.49
COPAP53621 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.74□□□□□ -1.49
COPAP53621 AP004607.3-201ENST00000530354 3915 ntBASIC5.74□□□□□ -1.49
COPAP53621 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.74□□□□□ -1.49
COPAP53621 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
COPAP53621 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
COPAP53621 AP005435.3-201ENST00000531260 3198 ntBASIC5.74□□□□□ -1.49
COPAP53621 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COPAP53621 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
COPAP53621 AP001029.2-203ENST00000589795 4910 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms