Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC8.38□□□□□ -1.07
SMARCA2P51531 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC8.38□□□□□ -1.07
SMARCA2P51531 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
SMARCA2P51531 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
SMARCA2P51531 RPL23AP26-201ENST00000412728 464 ntBASIC8.38□□□□□ -1.07
SMARCA2P51531 TMSB10P2-201ENST00000416049 131 ntBASIC8.38□□□□□ -1.07
SMARCA2P51531 H2AFZP5-201ENST00000446960 382 ntBASIC8.38□□□□□ -1.07
SMARCA2P51531 VN1R34P-201ENST00000447387 883 ntBASIC8.38□□□□□ -1.07
SMARCA2P51531 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC8.38□□□□□ -1.07
SMARCA2P51531 AC041039.1-201ENST00000485656 536 ntBASIC8.38□□□□□ -1.07
SMARCA2P51531 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC8.38□□□□□ -1.07
SMARCA2P51531 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC8.38□□□□□ -1.07
SMARCA2P51531 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC8.38□□□□□ -1.07
SMARCA2P51531 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
SMARCA2P51531 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SMARCA2P51531 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
SMARCA2P51531 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
SMARCA2P51531 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
SMARCA2P51531 AL137141.1-201ENST00000624622 4836 ntBASIC8.37□□□□□ -1.07
SMARCA2P51531 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SMARCA2P51531 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SMARCA2P51531 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SMARCA2P51531 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SMARCA2P51531 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
SMARCA2P51531 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SMARCA2P51531 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC8.37□□□□□ -1.07
SMARCA2P51531 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SMARCA2P51531 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SMARCA2P51531 AC021876.1-201ENST00000425959 359 ntBASIC8.37□□□□□ -1.07
SMARCA2P51531 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC8.37□□□□□ -1.07
SMARCA2P51531 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SMARCA2P51531 NPM1P18-201ENST00000434232 732 ntBASIC8.37□□□□□ -1.07
SMARCA2P51531 FTH1P16-201ENST00000435241 552 ntBASIC8.37□□□□□ -1.07
SMARCA2P51531 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC8.37□□□□□ -1.07
SMARCA2P51531 RNU4ATAC18P-201ENST00000516179 126 ntBASIC8.37□□□□□ -1.07
SMARCA2P51531 AP000827.1-201ENST00000527814 258 ntBASIC8.37□□□□□ -1.07
SMARCA2P51531 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC8.37□□□□□ -1.07
SMARCA2P51531 AC093249.4-201ENST00000564755 259 ntBASIC8.37□□□□□ -1.07
SMARCA2P51531 AC026367.3-201ENST00000619032 590 ntBASIC8.37□□□□□ -1.07
SMARCA2P51531 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC8.37□□□□□ -1.07
SMARCA2P51531 AC090220.1-201ENST00000593078 1699 ntBASIC8.37□□□□□ -1.07
SMARCA2P51531 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
SMARCA2P51531 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SMARCA2P51531 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
SMARCA2P51531 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SMARCA2P51531 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
SMARCA2P51531 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SMARCA2P51531 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SMARCA2P51531 AL672167.2-201ENST00000377164 879 ntBASIC8.36□□□□□ -1.07
SMARCA2P51531 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC8.36□□□□□ -1.07
SMARCA2P51531 RCC2P2-201ENST00000422174 918 ntBASIC8.36□□□□□ -1.07
SMARCA2P51531 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SMARCA2P51531 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC8.36□□□□□ -1.07
SMARCA2P51531 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC8.36□□□□□ -1.07
SMARCA2P51531 AC016559.2-201ENST00000510759 359 ntBASIC8.36□□□□□ -1.07
SMARCA2P51531 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC8.36□□□□□ -1.07
SMARCA2P51531 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
SMARCA2P51531 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SMARCA2P51531 AP001160.4-201ENST00000596971 382 ntBASIC8.36□□□□□ -1.07
SMARCA2P51531 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC8.36□□□□□ -1.07
SMARCA2P51531 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SMARCA2P51531 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC8.36□□□□□ -1.07
SMARCA2P51531 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
SMARCA2P51531 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SMARCA2P51531 AC020656.2-201ENST00000613291 5309 ntBASIC8.36□□□□□ -1.07
SMARCA2P51531 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SMARCA2P51531 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SMARCA2P51531 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC8.36□□□□□ -1.07
SMARCA2P51531 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SMARCA2P51531 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SMARCA2P51531 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC8.36□□□□□ -1.07
SMARCA2P51531 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
SMARCA2P51531 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC8.35□□□□□ -1.07
SMARCA2P51531 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC8.35□□□□□ -1.07
SMARCA2P51531 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC8.35□□□□□ -1.07
SMARCA2P51531 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC8.35□□□□□ -1.07
SMARCA2P51531 RRM2P4-201ENST00000441721 562 ntBASIC8.35□□□□□ -1.07
SMARCA2P51531 AC020890.1-201ENST00000491837 504 ntBASIC8.35□□□□□ -1.07
SMARCA2P51531 AC090058.1-201ENST00000498788 435 ntBASIC8.35□□□□□ -1.07
SMARCA2P51531 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC8.35□□□□□ -1.07
SMARCA2P51531 AC023632.4-201ENST00000517783 191 ntBASIC8.35□□□□□ -1.07
SMARCA2P51531 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC8.35□□□□□ -1.07
SMARCA2P51531 OR4A2P-201ENST00000527276 913 ntBASIC8.35□□□□□ -1.07
SMARCA2P51531 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SMARCA2P51531 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC8.35□□□□□ -1.07
SMARCA2P51531 AL161756.2-201ENST00000604597 246 ntBASIC8.35□□□□□ -1.07
SMARCA2P51531 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SMARCA2P51531 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
SMARCA2P51531 MAPK10-328ENST00000641553 4009 ntBASIC8.35□□□□□ -1.07
SMARCA2P51531 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC8.35□□□□□ -1.07
SMARCA2P51531 AC025031.4-201ENST00000621248 3271 ntBASIC8.35□□□□□ -1.07
SMARCA2P51531 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
SMARCA2P51531 AC090017.1-201ENST00000548612 1779 ntBASIC8.35□□□□□ -1.07
SMARCA2P51531 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
SMARCA2P51531 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
SMARCA2P51531 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
SMARCA2P51531 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SMARCA2P51531 SDHCP2-201ENST00000398565 501 ntBASIC8.35□□□□□ -1.07
SMARCA2P51531 EIF4EBP2P3-201ENST00000403144 334 ntBASIC8.35□□□□□ -1.07
SMARCA2P51531 ARL4AP5-201ENST00000404372 599 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms