Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CSNK1A1P48729 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 RNU1-106P-201ENST00000384382 164 ntBASIC4.42□□□□□ -1.7
CSNK1A1P48729 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AL021331.1-201ENST00000402817 582 ntBASIC4.42□□□□□ -1.7
CSNK1A1P48729 RPL5P19-201ENST00000404228 893 ntBASIC4.42□□□□□ -1.7
CSNK1A1P48729 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.42□□□□□ -1.7
CSNK1A1P48729 RN7SKP97-201ENST00000410966 333 ntBASIC4.42□□□□□ -1.7
CSNK1A1P48729 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AL137845.2-201ENST00000444292 988 ntBASIC4.42□□□□□ -1.7
CSNK1A1P48729 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AC074386.1-201ENST00000476560 767 ntBASIC4.42□□□□□ -1.7
CSNK1A1P48729 ECM1P2-201ENST00000503354 1577 ntBASIC4.42□□□□□ -1.7
CSNK1A1P48729 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 RNA5SP43-201ENST00000516559 110 ntBASIC4.42□□□□□ -1.7
CSNK1A1P48729 SCARNA21.2-201ENST00000516600 166 ntBASIC4.42□□□□□ -1.7
CSNK1A1P48729 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CSNK1A1P48729 RARSP1-201ENST00000542842 1418 ntBASIC4.42□□□□□ -1.7
CSNK1A1P48729 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AL390726.5-202ENST00000564800 256 ntBASIC4.42□□□□□ -1.7
CSNK1A1P48729 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AC093799.2-201ENST00000610062 578 ntBASIC4.42□□□□□ -1.7
CSNK1A1P48729 AL049794.2-201ENST00000616301 365 ntBASIC4.42□□□□□ -1.7
CSNK1A1P48729 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AP003499.2-201ENST00000624100 483 ntBASIC4.42□□□□□ -1.7
CSNK1A1P48729 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 LINC01739-205ENST00000641890 573 ntBASIC4.42□□□□□ -1.7
CSNK1A1P48729 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CSNK1A1P48729 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CSNK1A1P48729 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CSNK1A1P48729 AC233968.1-201ENST00000611212 1300 ntBASIC4.42□□□□□ -1.7
CSNK1A1P48729 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CSNK1A1P48729 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CSNK1A1P48729 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CSNK1A1P48729 NEAT1-202ENST00000501122 22743 ntBASIC4.41□□□□□ -1.7
CSNK1A1P48729 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSNK1A1P48729 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.41□□□□□ -1.7
CSNK1A1P48729 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSNK1A1P48729 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CSNK1A1P48729 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CSNK1A1P48729 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CSNK1A1P48729 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CSNK1A1P48729 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.41□□□□□ -1.7
CSNK1A1P48729 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSNK1A1P48729 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSNK1A1P48729 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSNK1A1P48729 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSNK1A1P48729 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSNK1A1P48729 RN7SKP224-201ENST00000364140 325 ntBASIC4.41□□□□□ -1.7
CSNK1A1P48729 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSNK1A1P48729 MT-RNR1-201ENST00000389680 954 ntBASIC4.41□□□□□ -1.7
CSNK1A1P48729 SNORA68.2-201ENST00000391263 128 ntBASIC4.41□□□□□ -1.7
CSNK1A1P48729 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.41□□□□□ -1.7
CSNK1A1P48729 RNU4-34P-201ENST00000410431 124 ntBASIC4.41□□□□□ -1.7
CSNK1A1P48729 RN7SKP213-201ENST00000410746 298 ntBASIC4.41□□□□□ -1.7
CSNK1A1P48729 QRSL1P2-201ENST00000418582 964 ntBASIC4.41□□□□□ -1.7
CSNK1A1P48729 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.41□□□□□ -1.7
CSNK1A1P48729 OR6C71P-201ENST00000432580 913 ntBASIC4.41□□□□□ -1.7
CSNK1A1P48729 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.41□□□□□ -1.7
CSNK1A1P48729 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSNK1A1P48729 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.41□□□□□ -1.7
CSNK1A1P48729 AC092647.3-201ENST00000443044 633 ntBASIC4.41□□□□□ -1.7
CSNK1A1P48729 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.41□□□□□ -1.7
CSNK1A1P48729 AL356981.1-201ENST00000454879 684 ntBASIC4.41□□□□□ -1.7
CSNK1A1P48729 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.41□□□□□ -1.7
CSNK1A1P48729 GYG1P1-201ENST00000460864 698 ntBASIC4.41□□□□□ -1.7
CSNK1A1P48729 RN7SL799P-201ENST00000475891 298 ntBASIC4.41□□□□□ -1.7
CSNK1A1P48729 RN7SKP147-201ENST00000517154 244 ntBASIC4.41□□□□□ -1.7
CSNK1A1P48729 AC013701.1-201ENST00000522657 465 ntBASIC4.41□□□□□ -1.7
CSNK1A1P48729 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.41□□□□□ -1.7
CSNK1A1P48729 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.41□□□□□ -1.7
CSNK1A1P48729 TVP23CP2-201ENST00000571473 623 ntBASIC4.41□□□□□ -1.7
CSNK1A1P48729 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.41□□□□□ -1.7
CSNK1A1P48729 AP000894.4-201ENST00000610185 483 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms