Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX2P48431 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.96□□□□□ -1.62
SOX2P48431 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX2P48431 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX2P48431 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
SOX2P48431 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX2P48431 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX2P48431 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX2P48431 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX2P48431 AC125494.3-201ENST00000602759 455 ntBASIC4.96□□□□□ -1.62
SOX2P48431 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX2P48431 AC005252.1-201ENST00000604518 1063 ntBASIC4.96□□□□□ -1.62
SOX2P48431 AC022001.1-201ENST00000605193 268 ntBASIC4.96□□□□□ -1.62
SOX2P48431 AC080013.6-201ENST00000606185 215 ntBASIC4.96□□□□□ -1.62
SOX2P48431 AC100847.1-201ENST00000611316 481 ntBASIC4.96□□□□□ -1.62
SOX2P48431 STMN1P1-201ENST00000617809 440 ntBASIC4.96□□□□□ -1.62
SOX2P48431 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX2P48431 AC024595.1-201ENST00000623088 387 ntBASIC4.96□□□□□ -1.62
SOX2P48431 ZNF663P-202ENST00000641770 1131 ntBASIC4.96□□□□□ -1.62
SOX2P48431 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX2P48431 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX2P48431 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SOX2P48431 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX2P48431 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX2P48431 MAPK10-328ENST00000641553 4009 ntBASIC4.96□□□□□ -1.62
SOX2P48431 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX2P48431 AC104454.1-201ENST00000421341 1401 ntBASIC4.96□□□□□ -1.62
SOX2P48431 GTF2H2B-203ENST00000508065 1432 ntBASIC4.96□□□□□ -1.62
SOX2P48431 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX2P48431 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SOX2P48431 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX2P48431 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX2P48431 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX2P48431 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX2P48431 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX2P48431 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.95□□□□□ -1.62
SOX2P48431 AC133552.1-201ENST00000569988 4007 ntBASIC4.95□□□□□ -1.62
SOX2P48431 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SOX2P48431 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX2P48431 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SOX2P48431 Y_RNA.169-201ENST00000363745 96 ntBASIC4.95□□□□□ -1.62
SOX2P48431 RN7SKP69-201ENST00000365390 305 ntBASIC4.95□□□□□ -1.62
SOX2P48431 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX2P48431 GPS2P1-201ENST00000411761 986 ntBASIC4.95□□□□□ -1.62
SOX2P48431 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.95□□□□□ -1.62
SOX2P48431 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.95□□□□□ -1.62
SOX2P48431 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.95□□□□□ -1.62
SOX2P48431 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX2P48431 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.95□□□□□ -1.62
SOX2P48431 FTH1P16-201ENST00000435241 552 ntBASIC4.95□□□□□ -1.62
SOX2P48431 CACYBPP1-201ENST00000438592 684 ntBASIC4.95□□□□□ -1.62
SOX2P48431 EIF5AP4-201ENST00000441206 465 ntBASIC4.95□□□□□ -1.62
SOX2P48431 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.95□□□□□ -1.62
SOX2P48431 EXTL2P1-201ENST00000446218 416 ntBASIC4.95□□□□□ -1.62
SOX2P48431 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.95□□□□□ -1.62
SOX2P48431 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX2P48431 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.95□□□□□ -1.62
SOX2P48431 ATG12P2-201ENST00000456830 416 ntBASIC4.95□□□□□ -1.62
SOX2P48431 RPS27AP2-201ENST00000457576 465 ntBASIC4.95□□□□□ -1.62
SOX2P48431 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.95□□□□□ -1.62
SOX2P48431 AC107015.1-201ENST00000466902 747 ntBASIC4.95□□□□□ -1.62
SOX2P48431 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SOX2P48431 PRDX3P4-201ENST00000470828 747 ntBASIC4.95□□□□□ -1.62
SOX2P48431 snoZ278.1-201ENST00000517059 112 ntBASIC4.95□□□□□ -1.62
SOX2P48431 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.95□□□□□ -1.62
SOX2P48431 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX2P48431 IGHVIII-11-1-201ENST00000522733 267 ntBASIC4.95□□□□□ -1.62
SOX2P48431 AC122688.1-201ENST00000541494 223 ntBASIC4.95□□□□□ -1.62
SOX2P48431 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.95□□□□□ -1.62
SOX2P48431 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX2P48431 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX2P48431 SETP1-201ENST00000556014 845 ntBASIC4.95□□□□□ -1.62
SOX2P48431 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX2P48431 AGGF1P7-201ENST00000562369 913 ntBASIC4.95□□□□□ -1.62
SOX2P48431 MT1CP-201ENST00000567054 174 ntBASIC4.95□□□□□ -1.62
SOX2P48431 AP001269.3-201ENST00000588718 329 ntBASIC4.95□□□□□ -1.62
SOX2P48431 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX2P48431 AL583856.2-201ENST00000606298 543 ntBASIC4.95□□□□□ -1.62
SOX2P48431 AL162574.1-201ENST00000615702 950 ntBASIC4.95□□□□□ -1.62
SOX2P48431 AL356274.1-201ENST00000617064 410 ntBASIC4.95□□□□□ -1.62
SOX2P48431 AL512506.2-201ENST00000624472 458 ntBASIC4.95□□□□□ -1.62
SOX2P48431 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.95□□□□□ -1.62
SOX2P48431 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.95□□□□□ -1.62
SOX2P48431 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SOX2P48431 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX2P48431 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX2P48431 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX2P48431 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
SOX2P48431 Z95331.1-201ENST00000623075 23112 ntBASIC4.95□□□□□ -1.62
SOX2P48431 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX2P48431 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.95□□□□□ -1.62
SOX2P48431 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SOX2P48431 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SOX2P48431 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SOX2P48431 AL138820.1-201ENST00000617901 5305 ntBASIC4.94□□□□□ -1.62
SOX2P48431 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SOX2P48431 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SOX2P48431 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX2P48431 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SOX2P48431 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms