Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.07□□□□□ -1.44
TM4SF4P48230 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.07□□□□□ -1.44
TM4SF4P48230 TMEM30CP-203ENST00000637814 1035 ntBASIC6.07□□□□□ -1.44
TM4SF4P48230 AC132825.7-201ENST00000638744 335 ntBASIC6.07□□□□□ -1.44
TM4SF4P48230 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TM4SF4P48230 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.07□□□□□ -1.44
TM4SF4P48230 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
TM4SF4P48230 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TM4SF4P48230 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TM4SF4P48230 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.07□□□□□ -1.44
TM4SF4P48230 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TM4SF4P48230 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TM4SF4P48230 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TM4SF4P48230 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
TM4SF4P48230 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.07□□□□□ -1.44
TM4SF4P48230 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TM4SF4P48230 OR4F13P-202ENST00000560066 2054 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.06□□□□□ -1.44
TM4SF4P48230 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.06□□□□□ -1.44
TM4SF4P48230 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TM4SF4P48230 SMG1P7-201ENST00000565246 2704 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.06□□□□□ -1.44
TM4SF4P48230 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.06□□□□□ -1.44
TM4SF4P48230 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TM4SF4P48230 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TM4SF4P48230 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
TM4SF4P48230 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
TM4SF4P48230 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TM4SF4P48230 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TM4SF4P48230 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TM4SF4P48230 RNU6-481P-201ENST00000384194 107 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 RNU6-452P-201ENST00000384406 107 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 RPL11P3-201ENST00000395256 523 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 HMGB3P19-201ENST00000403971 560 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 ATF1P1-201ENST00000406040 927 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 AP000357.1-201ENST00000409926 1165 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.06□□□□□ -1.44
TM4SF4P48230 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.06□□□□□ -1.44
TM4SF4P48230 AC004690.1-201ENST00000418216 328 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 EIF4A1P1-201ENST00000420241 934 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 RPS27AP7-201ENST00000422792 455 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.06□□□□□ -1.44
TM4SF4P48230 AC005189.1-201ENST00000431286 310 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 CYCSP11-201ENST00000436426 315 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.06□□□□□ -1.44
TM4SF4P48230 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.06□□□□□ -1.44
TM4SF4P48230 AL133244.1-201ENST00000456007 258 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.06□□□□□ -1.44
TM4SF4P48230 RNU7-27P-201ENST00000459281 62 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.06□□□□□ -1.44
TM4SF4P48230 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.06□□□□□ -1.44
TM4SF4P48230 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.06□□□□□ -1.44
TM4SF4P48230 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.06□□□□□ -1.44
TM4SF4P48230 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.06□□□□□ -1.44
TM4SF4P48230 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.06□□□□□ -1.44
TM4SF4P48230 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.06□□□□□ -1.44
TM4SF4P48230 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TM4SF4P48230 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TM4SF4P48230 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.06□□□□□ -1.44
TM4SF4P48230 AL109741.3-201ENST00000561748 592 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TM4SF4P48230 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.06□□□□□ -1.44
TM4SF4P48230 AC106734.1-201ENST00000568646 663 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.06□□□□□ -1.44
TM4SF4P48230 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.06□□□□□ -1.44
TM4SF4P48230 MIR4675-201ENST00000577898 77 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.06□□□□□ -1.44
TM4SF4P48230 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.06□□□□□ -1.44
TM4SF4P48230 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.06□□□□□ -1.44
TM4SF4P48230 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC6.06□□□□□ -1.44
TM4SF4P48230 AL356118.1-201ENST00000635272 1078 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 AC073869.8-201ENST00000641806 335 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.06□□□□□ -1.44
TM4SF4P48230 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.06□□□□□ -1.44
TM4SF4P48230 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TM4SF4P48230 AC092821.2-201ENST00000545710 2042 ntBASIC6.06□□□□□ -1.44
TM4SF4P48230 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TM4SF4P48230 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
TM4SF4P48230 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TM4SF4P48230 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TM4SF4P48230 AC068870.3-201ENST00000625077 2536 ntBASIC6.05□□□□□ -1.44
TM4SF4P48230 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.05□□□□□ -1.44
TM4SF4P48230 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.05□□□□□ -1.44
TM4SF4P48230 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TM4SF4P48230 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM4SF4P48230 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM4SF4P48230 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.05□□□□□ -1.44
TM4SF4P48230 KYNUP3-201ENST00000574386 1341 ntBASIC6.05□□□□□ -1.44
TM4SF4P48230 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM4SF4P48230 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM4SF4P48230 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
TM4SF4P48230 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
TM4SF4P48230 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
TM4SF4P48230 RNU6-1257P-201ENST00000384625 110 ntBASIC6.05□□□□□ -1.44
TM4SF4P48230 RNA5SP332-201ENST00000391063 115 ntBASIC6.05□□□□□ -1.44
TM4SF4P48230 RNA5SP113-201ENST00000410486 84 ntBASIC6.05□□□□□ -1.44
TM4SF4P48230 AL158825.1-201ENST00000414735 521 ntBASIC6.05□□□□□ -1.44
TM4SF4P48230 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.05□□□□□ -1.44
TM4SF4P48230 CNOT7P1-201ENST00000429006 852 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms