Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 RPL32P14-201ENST00000463196 378 ntBASIC4.49□□□□□ -1.69
CDX1P47902 AL157777.1-201ENST00000468100 304 ntBASIC4.49□□□□□ -1.69
CDX1P47902 CYCSP20-201ENST00000473154 315 ntBASIC4.49□□□□□ -1.69
CDX1P47902 RN7SL174P-201ENST00000475578 289 ntBASIC4.49□□□□□ -1.69
CDX1P47902 RN7SL717P-201ENST00000478343 297 ntBASIC4.49□□□□□ -1.69
CDX1P47902 RN7SL570P-201ENST00000484405 292 ntBASIC4.49□□□□□ -1.69
CDX1P47902 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.49□□□□□ -1.69
CDX1P47902 RN7SL101P-201ENST00000496350 279 ntBASIC4.49□□□□□ -1.69
CDX1P47902 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.49□□□□□ -1.69
CDX1P47902 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.49□□□□□ -1.69
CDX1P47902 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.49□□□□□ -1.69
CDX1P47902 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.49□□□□□ -1.69
CDX1P47902 AC021193.1-201ENST00000511607 420 ntBASIC4.49□□□□□ -1.69
CDX1P47902 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.49□□□□□ -1.69
CDX1P47902 RNU6-615P-201ENST00000516065 106 ntBASIC4.49□□□□□ -1.69
CDX1P47902 SOX5P1-201ENST00000524155 1127 ntBASIC4.49□□□□□ -1.69
CDX1P47902 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.49□□□□□ -1.69
CDX1P47902 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.49□□□□□ -1.69
CDX1P47902 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.49□□□□□ -1.69
CDX1P47902 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.49□□□□□ -1.69
CDX1P47902 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.49□□□□□ -1.69
CDX1P47902 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.49□□□□□ -1.69
CDX1P47902 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDX1P47902 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.49□□□□□ -1.69
CDX1P47902 AC015802.2-201ENST00000589690 189 ntBASIC4.49□□□□□ -1.69
CDX1P47902 AC016542.1-201ENST00000608259 493 ntBASIC4.49□□□□□ -1.69
CDX1P47902 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.49□□□□□ -1.69
CDX1P47902 RN7SL787P-201ENST00000613000 284 ntBASIC4.49□□□□□ -1.69
CDX1P47902 AC116447.1-201ENST00000613153 453 ntBASIC4.49□□□□□ -1.69
CDX1P47902 AC091932.2-201ENST00000623014 291 ntBASIC4.49□□□□□ -1.69
CDX1P47902 AC022919.1-201ENST00000624979 626 ntBASIC4.49□□□□□ -1.69
CDX1P47902 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.49□□□□□ -1.69
CDX1P47902 RNF6P1-201ENST00000444889 1784 ntBASIC4.49□□□□□ -1.69
CDX1P47902 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.49□□□□□ -1.69
CDX1P47902 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDX1P47902 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.49□□□□□ -1.69
CDX1P47902 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.49□□□□□ -1.69
CDX1P47902 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.49□□□□□ -1.69
CDX1P47902 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.49□□□□□ -1.69
CDX1P47902 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDX1P47902 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDX1P47902 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
CDX1P47902 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CDX1P47902 AL034549.2-201ENST00000618285 3373 ntBASIC4.48□□□□□ -1.69
CDX1P47902 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.48□□□□□ -1.69
CDX1P47902 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDX1P47902 MTCO1P18-201ENST00000455518 1419 ntBASIC4.48□□□□□ -1.69
CDX1P47902 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.48□□□□□ -1.69
CDX1P47902 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.48□□□□□ -1.69
CDX1P47902 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CDX1P47902 RNA5SP394-201ENST00000364216 119 ntBASIC4.48□□□□□ -1.69
CDX1P47902 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CDX1P47902 RNU6-178P-201ENST00000384631 104 ntBASIC4.48□□□□□ -1.69
CDX1P47902 AL078599.1-201ENST00000402075 293 ntBASIC4.48□□□□□ -1.69
CDX1P47902 HMGB1P20-201ENST00000402555 677 ntBASIC4.48□□□□□ -1.69
CDX1P47902 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDX1P47902 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.48□□□□□ -1.69
CDX1P47902 COX5BP7-201ENST00000414780 274 ntBASIC4.48□□□□□ -1.69
CDX1P47902 BMS1P17-202ENST00000416720 316 ntBASIC4.48□□□□□ -1.69
CDX1P47902 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.48□□□□□ -1.69
CDX1P47902 AL358176.3-201ENST00000420757 454 ntBASIC4.48□□□□□ -1.69
CDX1P47902 OR10T1P-201ENST00000424327 947 ntBASIC4.48□□□□□ -1.69
CDX1P47902 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.48□□□□□ -1.69
CDX1P47902 AC127526.2-201ENST00000426436 775 ntBASIC4.48□□□□□ -1.69
CDX1P47902 AC012497.1-201ENST00000429392 575 ntBASIC4.48□□□□□ -1.69
CDX1P47902 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.48□□□□□ -1.69
CDX1P47902 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.48□□□□□ -1.69
CDX1P47902 RPL7P29-201ENST00000437151 728 ntBASIC4.48□□□□□ -1.69
CDX1P47902 AC002504.1-201ENST00000438281 691 ntBASIC4.48□□□□□ -1.69
CDX1P47902 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.48□□□□□ -1.69
CDX1P47902 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.48□□□□□ -1.69
CDX1P47902 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.48□□□□□ -1.69
CDX1P47902 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.48□□□□□ -1.69
CDX1P47902 AL591623.2-201ENST00000449978 222 ntBASIC4.48□□□□□ -1.69
CDX1P47902 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.48□□□□□ -1.69
CDX1P47902 AC023141.9-201ENST00000458734 412 ntBASIC4.48□□□□□ -1.69
CDX1P47902 RPL21P47-201ENST00000483696 477 ntBASIC4.48□□□□□ -1.69
CDX1P47902 AC092902.1-201ENST00000486999 259 ntBASIC4.48□□□□□ -1.69
CDX1P47902 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.48□□□□□ -1.69
CDX1P47902 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.48□□□□□ -1.69
CDX1P47902 AC109481.1-201ENST00000509173 282 ntBASIC4.48□□□□□ -1.69
CDX1P47902 AC121161.1-201ENST00000510606 652 ntBASIC4.48□□□□□ -1.69
CDX1P47902 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.48□□□□□ -1.69
CDX1P47902 AC112206.4-201ENST00000515142 405 ntBASIC4.48□□□□□ -1.69
CDX1P47902 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.48□□□□□ -1.69
CDX1P47902 AC021678.3-201ENST00000517893 476 ntBASIC4.48□□□□□ -1.69
CDX1P47902 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.48□□□□□ -1.69
CDX1P47902 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.48□□□□□ -1.69
CDX1P47902 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.48□□□□□ -1.69
CDX1P47902 AC022404.1-201ENST00000555320 273 ntBASIC4.48□□□□□ -1.69
CDX1P47902 AC040958.1-201ENST00000561102 201 ntBASIC4.48□□□□□ -1.69
CDX1P47902 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.48□□□□□ -1.69
CDX1P47902 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.48□□□□□ -1.69
CDX1P47902 RN7SL753P-201ENST00000581238 290 ntBASIC4.48□□□□□ -1.69
CDX1P47902 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
CDX1P47902 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.48□□□□□ -1.69
CDX1P47902 AC012254.4-201ENST00000588843 273 ntBASIC4.48□□□□□ -1.69
CDX1P47902 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.48□□□□□ -1.69
CDX1P47902 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.48□□□□□ -1.69
CDX1P47902 VN1R84P-201ENST00000593697 235 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms