Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BRCC3P46736 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.2□□□□□ -1.58
BRCC3P46736 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
BRCC3P46736 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BRCC3P46736 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.2□□□□□ -1.58
BRCC3P46736 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.2□□□□□ -1.58
BRCC3P46736 AC068446.1-201ENST00000556425 1549 ntBASIC5.2□□□□□ -1.58
BRCC3P46736 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BRCC3P46736 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BRCC3P46736 RPS16P5-201ENST00000406501 404 ntBASIC5.2□□□□□ -1.58
BRCC3P46736 NPM1P40-201ENST00000412758 733 ntBASIC5.2□□□□□ -1.58
BRCC3P46736 COX5BP7-201ENST00000414780 274 ntBASIC5.2□□□□□ -1.58
BRCC3P46736 AC069213.2-201ENST00000420238 366 ntBASIC5.2□□□□□ -1.58
BRCC3P46736 AC245028.1-201ENST00000423259 256 ntBASIC5.2□□□□□ -1.58
BRCC3P46736 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BRCC3P46736 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.2□□□□□ -1.58
BRCC3P46736 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BRCC3P46736 AC009220.1-201ENST00000451614 275 ntBASIC5.2□□□□□ -1.58
BRCC3P46736 NDUFA12P1-201ENST00000455914 406 ntBASIC5.2□□□□□ -1.58
BRCC3P46736 RPL12P20-201ENST00000475538 479 ntBASIC5.2□□□□□ -1.58
BRCC3P46736 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
BRCC3P46736 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
BRCC3P46736 RNA5SP230-201ENST00000517039 122 ntBASIC5.2□□□□□ -1.58
BRCC3P46736 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.2□□□□□ -1.58
BRCC3P46736 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.2□□□□□ -1.58
BRCC3P46736 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.2□□□□□ -1.58
BRCC3P46736 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BRCC3P46736 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
BRCC3P46736 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.2□□□□□ -1.58
BRCC3P46736 AC025423.2-201ENST00000537570 439 ntBASIC5.2□□□□□ -1.58
BRCC3P46736 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.2□□□□□ -1.58
BRCC3P46736 GSTP1P1-201ENST00000548078 319 ntBASIC5.2□□□□□ -1.58
BRCC3P46736 ELOCP28-201ENST00000590044 317 ntBASIC5.2□□□□□ -1.58
BRCC3P46736 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.2□□□□□ -1.58
BRCC3P46736 AC234771.5-201ENST00000600161 514 ntBASIC5.2□□□□□ -1.58
BRCC3P46736 AC098935.2-201ENST00000604222 466 ntBASIC5.2□□□□□ -1.58
BRCC3P46736 MIR6853-201ENST00000619642 74 ntBASIC5.2□□□□□ -1.58
BRCC3P46736 CR381572.2-201ENST00000624852 397 ntBASIC5.2□□□□□ -1.58
BRCC3P46736 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.2□□□□□ -1.58
BRCC3P46736 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
BRCC3P46736 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.2□□□□□ -1.58
BRCC3P46736 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BRCC3P46736 AC008758.3-201ENST00000507003 1829 ntBASIC5.2□□□□□ -1.58
BRCC3P46736 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
BRCC3P46736 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BRCC3P46736 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.19□□□□□ -1.58
BRCC3P46736 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRCC3P46736 AC097063.1-201ENST00000426714 1797 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRCC3P46736 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRCC3P46736 TRIM51GP-201ENST00000534741 1350 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
BRCC3P46736 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.19□□□□□ -1.58
BRCC3P46736 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRCC3P46736 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
BRCC3P46736 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRCC3P46736 AL590240.1-201ENST00000334118 313 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRCC3P46736 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
BRCC3P46736 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.19□□□□□ -1.58
BRCC3P46736 FAR2P2-201ENST00000413041 594 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 PCNPP4-201ENST00000414817 517 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
BRCC3P46736 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.19□□□□□ -1.58
BRCC3P46736 FAR2P4-202ENST00000425399 584 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 HMGB1P32-201ENST00000425971 565 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
BRCC3P46736 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.19□□□□□ -1.58
BRCC3P46736 TPT1P13-201ENST00000449760 499 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.19□□□□□ -1.58
BRCC3P46736 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.19□□□□□ -1.58
BRCC3P46736 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.19□□□□□ -1.58
BRCC3P46736 AC104849.1-201ENST00000462623 405 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 AC096741.1-201ENST00000472250 846 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.19□□□□□ -1.58
BRCC3P46736 RPL5P22-201ENST00000480199 884 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 AP000926.3-201ENST00000497201 299 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 AC138409.2-202ENST00000507274 458 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.19□□□□□ -1.58
BRCC3P46736 RNU4-18P-201ENST00000516751 149 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.19□□□□□ -1.58
BRCC3P46736 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.19□□□□□ -1.58
BRCC3P46736 AC133555.2-201ENST00000550213 292 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 AC116553.2-201ENST00000564203 463 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.19□□□□□ -1.58
BRCC3P46736 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.19□□□□□ -1.58
BRCC3P46736 AP000919.1-201ENST00000582850 985 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.19□□□□□ -1.58
BRCC3P46736 AC022726.1-201ENST00000587475 207 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 AC068790.7-201ENST00000602347 528 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.19□□□□□ -1.58
BRCC3P46736 AC002044.3-201ENST00000623314 541 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 AC243960.7-201ENST00000623532 707 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 AL513548.1-201ENST00000562904 1724 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 CUL4AP1-201ENST00000514750 1863 ntBASIC5.19□□□□□ -1.58
BRCC3P46736 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
BRCC3P46736 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
BRCC3P46736 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
BRCC3P46736 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.19□□□□□ -1.58
BRCC3P46736 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms