Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AL645937.3-201ENST00000453647 936 ntBASIC5.53□□□□□ -1.52
USP8P40818 C1DP3-201ENST00000455013 423 ntBASIC5.53□□□□□ -1.52
USP8P40818 AC104849.1-201ENST00000462623 405 ntBASIC5.53□□□□□ -1.52
USP8P40818 AC009127.1-201ENST00000467090 155 ntBASIC5.53□□□□□ -1.52
USP8P40818 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
USP8P40818 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.53□□□□□ -1.52
USP8P40818 AC011411.1-201ENST00000509592 876 ntBASIC5.53□□□□□ -1.52
USP8P40818 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.53□□□□□ -1.52
USP8P40818 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.53□□□□□ -1.52
USP8P40818 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.53□□□□□ -1.52
USP8P40818 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.53□□□□□ -1.52
USP8P40818 AC104997.1-201ENST00000519761 717 ntBASIC5.53□□□□□ -1.52
USP8P40818 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.53□□□□□ -1.52
USP8P40818 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.53□□□□□ -1.52
USP8P40818 AL137072.1-201ENST00000603444 466 ntBASIC5.53□□□□□ -1.52
USP8P40818 AL158211.2-201ENST00000607282 395 ntBASIC5.53□□□□□ -1.52
USP8P40818 AL353600.1-201ENST00000608148 251 ntBASIC5.53□□□□□ -1.52
USP8P40818 AP000864.1-201ENST00000609424 650 ntBASIC5.53□□□□□ -1.52
USP8P40818 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.53□□□□□ -1.52
USP8P40818 AC253576.2-201ENST00000618815 580 ntBASIC5.53□□□□□ -1.52
USP8P40818 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.53□□□□□ -1.52
USP8P40818 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
USP8P40818 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.53□□□□□ -1.52
USP8P40818 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP8P40818 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP8P40818 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.53□□□□□ -1.52
USP8P40818 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP8P40818 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.53□□□□□ -1.52
USP8P40818 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP8P40818 MTND4P21-201ENST00000453886 1357 ntBASIC5.53□□□□□ -1.52
USP8P40818 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP8P40818 MTND5P23-201ENST00000430812 1655 ntBASIC5.53□□□□□ -1.52
USP8P40818 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.53□□□□□ -1.52
USP8P40818 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP8P40818 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
USP8P40818 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP8P40818 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.52□□□□□ -1.53
USP8P40818 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP8P40818 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.52□□□□□ -1.53
USP8P40818 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.52□□□□□ -1.53
USP8P40818 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USP8P40818 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.52□□□□□ -1.53
USP8P40818 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.52□□□□□ -1.53
USP8P40818 RPS4XP16-201ENST00000427198 791 ntBASIC5.52□□□□□ -1.53
USP8P40818 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.52□□□□□ -1.53
USP8P40818 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.52□□□□□ -1.53
USP8P40818 AL691517.1-201ENST00000440833 1235 ntBASIC5.52□□□□□ -1.53
USP8P40818 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.52□□□□□ -1.53
USP8P40818 PPIAP20-201ENST00000449839 135 ntBASIC5.52□□□□□ -1.53
USP8P40818 RPS6P2-201ENST00000454208 705 ntBASIC5.52□□□□□ -1.53
USP8P40818 AC112206.1-201ENST00000468416 477 ntBASIC5.52□□□□□ -1.53
USP8P40818 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USP8P40818 AC097173.1-201ENST00000505862 819 ntBASIC5.52□□□□□ -1.53
USP8P40818 RNA5SP303-201ENST00000516192 130 ntBASIC5.52□□□□□ -1.53
USP8P40818 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.52□□□□□ -1.53
USP8P40818 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.52□□□□□ -1.53
USP8P40818 AC134349.2-201ENST00000535136 910 ntBASIC5.52□□□□□ -1.53
USP8P40818 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.52□□□□□ -1.53
USP8P40818 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.52□□□□□ -1.53
USP8P40818 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.52□□□□□ -1.53
USP8P40818 AL713998.2-201ENST00000604538 1198 ntBASIC5.52□□□□□ -1.53
USP8P40818 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.52□□□□□ -1.53
USP8P40818 SNORD91B-202ENST00000608459 222 ntBASIC5.52□□□□□ -1.53
USP8P40818 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.52□□□□□ -1.53
USP8P40818 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
USP8P40818 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.52□□□□□ -1.53
USP8P40818 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP8P40818 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
USP8P40818 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP8P40818 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP8P40818 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.52□□□□□ -1.53
USP8P40818 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USP8P40818 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.52□□□□□ -1.53
USP8P40818 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP8P40818 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP8P40818 DDX18P4-201ENST00000511690 1966 ntBASIC5.51□□□□□ -1.53
USP8P40818 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP8P40818 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP8P40818 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.51□□□□□ -1.53
USP8P40818 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP8P40818 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.51□□□□□ -1.53
USP8P40818 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.51□□□□□ -1.53
USP8P40818 Y_RNA.62-201ENST00000362840 99 ntBASIC5.51□□□□□ -1.53
USP8P40818 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP8P40818 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP8P40818 RN7SKP126-201ENST00000411143 300 ntBASIC5.51□□□□□ -1.53
USP8P40818 AL356968.2-201ENST00000412769 1257 ntBASIC5.51□□□□□ -1.53
USP8P40818 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.51□□□□□ -1.53
USP8P40818 MARK2P12-201ENST00000420129 585 ntBASIC5.51□□□□□ -1.53
USP8P40818 OR5M12P-201ENST00000423388 929 ntBASIC5.51□□□□□ -1.53
USP8P40818 CR848007.2-201ENST00000424918 787 ntBASIC5.51□□□□□ -1.53
USP8P40818 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.51□□□□□ -1.53
USP8P40818 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.51□□□□□ -1.53
USP8P40818 RPS15AP29-201ENST00000445539 400 ntBASIC5.51□□□□□ -1.53
USP8P40818 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.51□□□□□ -1.53
USP8P40818 AC239798.3-201ENST00000454459 408 ntBASIC5.51□□□□□ -1.53
USP8P40818 CYCSP34-201ENST00000458172 304 ntBASIC5.51□□□□□ -1.53
USP8P40818 AC024558.1-201ENST00000505008 528 ntBASIC5.51□□□□□ -1.53
USP8P40818 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.51□□□□□ -1.53
USP8P40818 ATP5LP3-201ENST00000514223 304 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms