Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA9P31269 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA9P31269 SNORA70F-201ENST00000384142 135 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 RNA5SP296-201ENST00000410523 111 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 RSU1P3-201ENST00000412878 835 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 AC009480.2-201ENST00000422916 432 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 AC016831.4-201ENST00000438302 307 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 snoU13.1-201ENST00000459157 104 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 FTH1P2-201ENST00000466086 412 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 OR2A3P-201ENST00000493774 953 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 IGKV2D-10-201ENST00000520194 281 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 AC092709.1-201ENST00000521355 1045 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA9P31269 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXA9P31269 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA9P31269 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA9P31269 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.14□□□□□ -1.59
HOXA9P31269 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA9P31269 AL390334.1-201ENST00000556395 450 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXA9P31269 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA9P31269 AP000919.1-201ENST00000582850 985 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 AC010424.2-201ENST00000607594 443 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 AC006840.1-201ENST00000623069 542 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXA9P31269 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HOXA9P31269 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HOXA9P31269 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXA9P31269 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 AL132640.2-201ENST00000559968 1698 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXA9P31269 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXA9P31269 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HOXA9P31269 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXA9P31269 AC092111.2-201ENST00000611627 1414 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA9P31269 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA9P31269 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA9P31269 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
HOXA9P31269 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.13□□□□□ -1.59
HOXA9P31269 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXA9P31269 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA9P31269 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXA9P31269 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HOXA9P31269 U3.30-201ENST00000391308 210 ntBASIC5.13□□□□□ -1.59
HOXA9P31269 AC069213.2-201ENST00000420238 366 ntBASIC5.13□□□□□ -1.59
HOXA9P31269 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.13□□□□□ -1.59
HOXA9P31269 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXA9P31269 AC010733.1-201ENST00000451515 401 ntBASIC5.13□□□□□ -1.59
HOXA9P31269 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXA9P31269 OR52E3P-201ENST00000452083 936 ntBASIC5.13□□□□□ -1.59
HOXA9P31269 RPS17P2-201ENST00000461663 408 ntBASIC5.13□□□□□ -1.59
HOXA9P31269 MORF4L2P1-201ENST00000503761 858 ntBASIC5.13□□□□□ -1.59
HOXA9P31269 HPRT1P1-201ENST00000509498 657 ntBASIC5.13□□□□□ -1.59
HOXA9P31269 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXA9P31269 RN7SKP92-201ENST00000517266 244 ntBASIC5.13□□□□□ -1.59
HOXA9P31269 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXA9P31269 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.13□□□□□ -1.59
HOXA9P31269 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXA9P31269 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXA9P31269 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.13□□□□□ -1.59
HOXA9P31269 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.13□□□□□ -1.59
HOXA9P31269 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXA9P31269 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA9P31269 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA9P31269 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXA9P31269 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA9P31269 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA9P31269 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
HOXA9P31269 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA9P31269 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA9P31269 AC003985.2-201ENST00000562268 1669 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA9P31269 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA9P31269 AC126755.2-208ENST00000327792 462 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 AC138969.1-213ENST00000331436 462 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 RNA5SP345-201ENST00000410646 108 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXA9P31269 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXA9P31269 TBCAP2-201ENST00000416175 326 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 GSTA7P-201ENST00000438425 448 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 TXNP2-201ENST00000443918 295 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 AC000111.2-201ENST00000448200 210 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXA9P31269 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA9P31269 RPS23P7-201ENST00000466210 444 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.12□□□□□ -1.59
HOXA9P31269 AK3P4-201ENST00000504283 583 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 AC093720.1-201ENST00000505681 714 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 AC016559.2-201ENST00000510759 359 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.12□□□□□ -1.59
HOXA9P31269 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA9P31269 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA9P31269 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA9P31269 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA9P31269 LSM3P2-201ENST00000551246 273 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 AL110118.1-201ENST00000553543 400 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 AC136624.4-201ENST00000573044 370 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 RPL26P30-202ENST00000602923 645 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 227 ms