Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC011447.7-201ENST00000624228 1590 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 AC011493.1-201ENST00000596753 1632 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 BX005019.1-201ENST00000561881 1810 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN6P29350 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN6P29350 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN6P29350 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN6P29350 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN6P29350 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PTPN6P29350 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PTPN6P29350 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN6P29350 CASC19-284ENST00000642142 1868 ntBASIC4.84□□□□□ -1.63
PTPN6P29350 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PTPN6P29350 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN6P29350 RN7SKP224-201ENST00000364140 325 ntBASIC4.84□□□□□ -1.63
PTPN6P29350 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN6P29350 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PTPN6P29350 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PTPN6P29350 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN6P29350 MIR1182-201ENST00000408363 97 ntBASIC4.84□□□□□ -1.63
PTPN6P29350 RNU4-34P-201ENST00000410431 124 ntBASIC4.84□□□□□ -1.63
PTPN6P29350 RNU2-50P-201ENST00000410494 143 ntBASIC4.84□□□□□ -1.63
PTPN6P29350 COX6CP13-201ENST00000428703 226 ntBASIC4.84□□□□□ -1.63
PTPN6P29350 MTCO1P45-201ENST00000431457 267 ntBASIC4.84□□□□□ -1.63
PTPN6P29350 CYCSP11-201ENST00000436426 315 ntBASIC4.84□□□□□ -1.63
PTPN6P29350 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.84□□□□□ -1.63
PTPN6P29350 AL356981.1-201ENST00000454879 684 ntBASIC4.84□□□□□ -1.63
PTPN6P29350 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN6P29350 AC104629.2-201ENST00000468627 598 ntBASIC4.84□□□□□ -1.63
PTPN6P29350 RN7SL222P-201ENST00000476452 299 ntBASIC4.84□□□□□ -1.63
PTPN6P29350 RN7SL441P-201ENST00000492388 296 ntBASIC4.84□□□□□ -1.63
PTPN6P29350 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN6P29350 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN6P29350 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.84□□□□□ -1.63
PTPN6P29350 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.84□□□□□ -1.63
PTPN6P29350 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN6P29350 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.84□□□□□ -1.63
PTPN6P29350 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.84□□□□□ -1.63
PTPN6P29350 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.84□□□□□ -1.63
PTPN6P29350 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.84□□□□□ -1.63
PTPN6P29350 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN6P29350 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN6P29350 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.84□□□□□ -1.63
PTPN6P29350 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN6P29350 AC084373.1-201ENST00000603311 235 ntBASIC4.84□□□□□ -1.63
PTPN6P29350 AC126915.2-201ENST00000610957 190 ntBASIC4.84□□□□□ -1.63
PTPN6P29350 RPSAP73-201ENST00000614820 330 ntBASIC4.84□□□□□ -1.63
PTPN6P29350 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.84□□□□□ -1.63
PTPN6P29350 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.84□□□□□ -1.63
PTPN6P29350 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.84□□□□□ -1.63
PTPN6P29350 AP002505.2-201ENST00000623585 696 ntBASIC4.84□□□□□ -1.63
PTPN6P29350 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN6P29350 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN6P29350 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PTPN6P29350 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.84□□□□□ -1.64
PTPN6P29350 AL022322.2-201ENST00000624072 20397 ntBASIC4.84□□□□□ -1.64
PTPN6P29350 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PTPN6P29350 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.84□□□□□ -1.64
PTPN6P29350 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
PTPN6P29350 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.84□□□□□ -1.64
PTPN6P29350 C4BPAP1-201ENST00000415474 1893 ntBASIC4.83□□□□□ -1.64
PTPN6P29350 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
PTPN6P29350 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
PTPN6P29350 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN6P29350 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.83□□□□□ -1.64
PTPN6P29350 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PTPN6P29350 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.83□□□□□ -1.64
PTPN6P29350 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.83□□□□□ -1.64
PTPN6P29350 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN6P29350 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PTPN6P29350 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.83□□□□□ -1.64
PTPN6P29350 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PTPN6P29350 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN6P29350 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
PTPN6P29350 MIR7-1-201ENST00000384871 110 ntBASIC4.83□□□□□ -1.64
PTPN6P29350 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN6P29350 OR6C64P-201ENST00000419708 825 ntBASIC4.83□□□□□ -1.64
PTPN6P29350 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN6P29350 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.83□□□□□ -1.64
PTPN6P29350 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.83□□□□□ -1.64
PTPN6P29350 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.83□□□□□ -1.64
PTPN6P29350 RPS29P10-201ENST00000439197 166 ntBASIC4.83□□□□□ -1.64
PTPN6P29350 ARL5AP3-201ENST00000439327 386 ntBASIC4.83□□□□□ -1.64
PTPN6P29350 CASP3P1-201ENST00000446037 609 ntBASIC4.83□□□□□ -1.64
PTPN6P29350 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.83□□□□□ -1.64
PTPN6P29350 CALM1P2-201ENST00000452941 448 ntBASIC4.83□□□□□ -1.64
PTPN6P29350 RPS17P2-201ENST00000461663 408 ntBASIC4.83□□□□□ -1.64
PTPN6P29350 AC096741.1-201ENST00000472250 846 ntBASIC4.83□□□□□ -1.64
PTPN6P29350 RPS4XP20-201ENST00000505751 772 ntBASIC4.83□□□□□ -1.64
PTPN6P29350 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN6P29350 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN6P29350 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN6P29350 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.83□□□□□ -1.64
PTPN6P29350 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN6P29350 AC127381.1-201ENST00000555979 939 ntBASIC4.83□□□□□ -1.64
PTPN6P29350 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
PTPN6P29350 AC116553.2-201ENST00000564203 463 ntBASIC4.83□□□□□ -1.64
PTPN6P29350 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN6P29350 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.83□□□□□ -1.64
PTPN6P29350 AL021707.7-201ENST00000607991 416 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms