Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC091564.1-201ENST00000464563 479 ntBASIC7.44□□□□□ -1.22
RFX1P22670 RPS3AP17-201ENST00000472594 777 ntBASIC7.44□□□□□ -1.22
RFX1P22670 AC021678.1-201ENST00000505195 936 ntBASIC7.44□□□□□ -1.22
RFX1P22670 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC7.44□□□□□ -1.22
RFX1P22670 AC091133.4-201ENST00000511142 308 ntBASIC7.44□□□□□ -1.22
RFX1P22670 DCAF13P2-201ENST00000514188 555 ntBASIC7.44□□□□□ -1.22
RFX1P22670 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC7.44□□□□□ -1.22
RFX1P22670 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC7.44□□□□□ -1.22
RFX1P22670 AF279873.1-201ENST00000523393 313 ntBASIC7.44□□□□□ -1.22
RFX1P22670 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.44□□□□□ -1.22
RFX1P22670 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC7.44□□□□□ -1.22
RFX1P22670 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.44□□□□□ -1.22
RFX1P22670 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.44□□□□□ -1.22
RFX1P22670 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.44□□□□□ -1.22
RFX1P22670 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC7.44□□□□□ -1.22
RFX1P22670 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
RFX1P22670 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.44□□□□□ -1.22
RFX1P22670 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC7.44□□□□□ -1.22
RFX1P22670 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.44□□□□□ -1.22
RFX1P22670 AC006960.3-201ENST00000561845 705 ntBASIC7.44□□□□□ -1.22
RFX1P22670 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
RFX1P22670 MIR378C-201ENST00000578683 81 ntBASIC7.44□□□□□ -1.22
RFX1P22670 MIR5095-201ENST00000578844 88 ntBASIC7.44□□□□□ -1.22
RFX1P22670 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC7.44□□□□□ -1.22
RFX1P22670 MIR4428-201ENST00000584884 73 ntBASIC7.44□□□□□ -1.22
RFX1P22670 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC7.44□□□□□ -1.22
RFX1P22670 AC011921.2-201ENST00000589465 152 ntBASIC7.44□□□□□ -1.22
RFX1P22670 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.44□□□□□ -1.22
RFX1P22670 AC115286.1-201ENST00000604298 434 ntBASIC7.44□□□□□ -1.22
RFX1P22670 AP000860.1-201ENST00000605250 559 ntBASIC7.44□□□□□ -1.22
RFX1P22670 AC010857.1-201ENST00000606398 594 ntBASIC7.44□□□□□ -1.22
RFX1P22670 AC010333.3-201ENST00000615100 402 ntBASIC7.44□□□□□ -1.22
RFX1P22670 AC108479.2-201ENST00000617314 601 ntBASIC7.44□□□□□ -1.22
RFX1P22670 AC072046.2-201ENST00000618366 268 ntBASIC7.44□□□□□ -1.22
RFX1P22670 OR1N1-202ENST00000619659 939 ntBASIC7.44□□□□□ -1.22
RFX1P22670 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.44□□□□□ -1.22
RFX1P22670 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
RFX1P22670 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.44□□□□□ -1.22
RFX1P22670 AC016745.2-201ENST00000608834 3443 ntBASIC7.44□□□□□ -1.22
RFX1P22670 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
RFX1P22670 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.44□□□□□ -1.22
RFX1P22670 AC007485.2-201ENST00000623493 1667 ntBASIC7.44□□□□□ -1.22
RFX1P22670 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RFX1P22670 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC7.44□□□□□ -1.22
RFX1P22670 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RFX1P22670 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RFX1P22670 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RFX1P22670 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC7.44□□□□□ -1.22
RFX1P22670 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RFX1P22670 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.43□□□□□ -1.22
RFX1P22670 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.43□□□□□ -1.22
RFX1P22670 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RFX1P22670 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RFX1P22670 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
RFX1P22670 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RFX1P22670 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RFX1P22670 UGT2B27P-201ENST00000505092 1620 ntBASIC7.43□□□□□ -1.22
RFX1P22670 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RFX1P22670 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RFX1P22670 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RFX1P22670 FUNDC2P3-201ENST00000334716 533 ntBASIC7.43□□□□□ -1.22
RFX1P22670 RNA5SP65-201ENST00000363166 119 ntBASIC7.43□□□□□ -1.22
RFX1P22670 RN7SKP269-201ENST00000365545 319 ntBASIC7.43□□□□□ -1.22
RFX1P22670 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
RFX1P22670 RNU6-297P-201ENST00000384636 107 ntBASIC7.43□□□□□ -1.22
RFX1P22670 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RFX1P22670 SNORA40.3-201ENST00000390964 122 ntBASIC7.43□□□□□ -1.22
RFX1P22670 AC025750.1-201ENST00000399891 379 ntBASIC7.43□□□□□ -1.22
RFX1P22670 AGR3-202ENST00000402239 563 ntTSL 2 BASIC7.43□□□□□ -1.22
RFX1P22670 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RFX1P22670 ZNF863P-201ENST00000426746 417 ntBASIC7.43□□□□□ -1.22
RFX1P22670 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.43□□□□□ -1.22
RFX1P22670 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
RFX1P22670 AC000111.3-201ENST00000433478 193 ntBASIC7.43□□□□□ -1.22
RFX1P22670 FABP5P2-201ENST00000439042 408 ntBASIC7.43□□□□□ -1.22
RFX1P22670 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC7.43□□□□□ -1.22
RFX1P22670 AC244505.5-201ENST00000443639 207 ntBASIC7.43□□□□□ -1.22
RFX1P22670 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.43□□□□□ -1.22
RFX1P22670 RPL7AP52-201ENST00000458096 790 ntBASIC7.43□□□□□ -1.22
RFX1P22670 AC018638.3-201ENST00000461273 132 ntBASIC7.43□□□□□ -1.22
RFX1P22670 AL121769.1-201ENST00000469473 401 ntBASIC7.43□□□□□ -1.22
RFX1P22670 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC7.43□□□□□ -1.22
RFX1P22670 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RFX1P22670 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC7.43□□□□□ -1.22
RFX1P22670 AC109481.1-201ENST00000509173 282 ntBASIC7.43□□□□□ -1.22
RFX1P22670 RNA5SP473-201ENST00000516402 125 ntBASIC7.43□□□□□ -1.22
RFX1P22670 RN7SKP11-201ENST00000517018 287 ntBASIC7.43□□□□□ -1.22
RFX1P22670 LY96-202ENST00000518893 430 ntTSL 3 BASIC7.43□□□□□ -1.22
RFX1P22670 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.43□□□□□ -1.22
RFX1P22670 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.43□□□□□ -1.22
RFX1P22670 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC7.43□□□□□ -1.22
RFX1P22670 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.43□□□□□ -1.22
RFX1P22670 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.43□□□□□ -1.22
RFX1P22670 MIR212-201ENST00000586026 110 ntBASIC7.43□□□□□ -1.22
RFX1P22670 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC7.43□□□□□ -1.22
RFX1P22670 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC7.43□□□□□ -1.22
RFX1P22670 AC090578.1-201ENST00000604955 591 ntBASIC7.43□□□□□ -1.22
RFX1P22670 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RFX1P22670 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RFX1P22670 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms