Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.95□□□□□ -1.62
XRCC1P18887 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.95□□□□□ -1.62
XRCC1P18887 AC105254.2-201ENST00000603636 436 ntBASIC4.95□□□□□ -1.62
XRCC1P18887 BNIP3P35-201ENST00000604530 490 ntBASIC4.95□□□□□ -1.62
XRCC1P18887 AC004948.1-201ENST00000609858 672 ntBASIC4.95□□□□□ -1.62
XRCC1P18887 AL049539.1-201ENST00000611964 459 ntBASIC4.95□□□□□ -1.62
XRCC1P18887 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.95□□□□□ -1.62
XRCC1P18887 AC053481.2-202ENST00000582394 1500 ntBASIC4.95□□□□□ -1.62
XRCC1P18887 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
XRCC1P18887 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.95□□□□□ -1.62
XRCC1P18887 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.95□□□□□ -1.62
XRCC1P18887 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
XRCC1P18887 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
XRCC1P18887 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
XRCC1P18887 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.94□□□□□ -1.62
XRCC1P18887 SALL4P2-201ENST00000423288 2910 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
XRCC1P18887 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
XRCC1P18887 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
XRCC1P18887 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.94□□□□□ -1.62
XRCC1P18887 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
XRCC1P18887 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
XRCC1P18887 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.94□□□□□ -1.62
XRCC1P18887 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
XRCC1P18887 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
XRCC1P18887 RNA5SP428-201ENST00000365129 132 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 SNORA2.3-201ENST00000383920 135 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 SNORA51.8-201ENST00000384234 132 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 AL390316.1-201ENST00000406279 553 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.94□□□□□ -1.62
XRCC1P18887 RBMY2KP-201ENST00000418221 992 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 SETP10-201ENST00000424368 814 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 AC012519.1-201ENST00000424588 610 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 OR7E125P-201ENST00000443450 846 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
XRCC1P18887 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.94□□□□□ -1.62
XRCC1P18887 AC005412.2-201ENST00000492004 341 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.94□□□□□ -1.62
XRCC1P18887 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 RNA5SP464-201ENST00000516251 108 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 AC008033.2-201ENST00000542626 177 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.94□□□□□ -1.62
XRCC1P18887 EDDM3DP-201ENST00000554692 434 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.94□□□□□ -1.62
XRCC1P18887 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.94□□□□□ -1.62
XRCC1P18887 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.94□□□□□ -1.62
XRCC1P18887 AGGF1P9-201ENST00000561884 913 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.94□□□□□ -1.62
XRCC1P18887 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.94□□□□□ -1.62
XRCC1P18887 AL445528.2-201ENST00000620582 470 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 AC074140.1-201ENST00000621617 208 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 AC073429.2-201ENST00000569694 1444 ntBASIC4.94□□□□□ -1.62
XRCC1P18887 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.94□□□□□ -1.62
XRCC1P18887 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
XRCC1P18887 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
XRCC1P18887 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
XRCC1P18887 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
XRCC1P18887 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
XRCC1P18887 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
XRCC1P18887 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
XRCC1P18887 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
XRCC1P18887 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
XRCC1P18887 AC245100.2-201ENST00000454544 1679 ntBASIC4.93□□□□□ -1.62
XRCC1P18887 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
XRCC1P18887 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
XRCC1P18887 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
XRCC1P18887 RN7SKP95-201ENST00000362860 303 ntBASIC4.93□□□□□ -1.62
XRCC1P18887 AP002530.1-201ENST00000405705 684 ntBASIC4.93□□□□□ -1.62
XRCC1P18887 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
XRCC1P18887 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
XRCC1P18887 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.93□□□□□ -1.62
XRCC1P18887 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.93□□□□□ -1.62
XRCC1P18887 COX6CP13-201ENST00000428703 226 ntBASIC4.93□□□□□ -1.62
XRCC1P18887 RHOT1P3-201ENST00000436571 331 ntBASIC4.93□□□□□ -1.62
XRCC1P18887 PA2G4P6-201ENST00000438325 1197 ntBASIC4.93□□□□□ -1.62
XRCC1P18887 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.93□□□□□ -1.62
XRCC1P18887 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.93□□□□□ -1.62
XRCC1P18887 AC073648.4-201ENST00000442655 781 ntBASIC4.93□□□□□ -1.62
XRCC1P18887 SUMO2P1-206ENST00000445436 284 ntBASIC4.93□□□□□ -1.62
XRCC1P18887 AL031584.1-201ENST00000447169 754 ntBASIC4.93□□□□□ -1.62
XRCC1P18887 AC140172.1-201ENST00000502928 141 ntBASIC4.93□□□□□ -1.62
XRCC1P18887 BTG4P1-201ENST00000510421 183 ntBASIC4.93□□□□□ -1.62
XRCC1P18887 RFPL4AP5-201ENST00000514977 504 ntBASIC4.93□□□□□ -1.62
XRCC1P18887 RNA5SP43-201ENST00000516559 110 ntBASIC4.93□□□□□ -1.62
XRCC1P18887 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.93□□□□□ -1.62
XRCC1P18887 AC005000.1-201ENST00000536192 288 ntBASIC4.93□□□□□ -1.62
XRCC1P18887 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.93□□□□□ -1.62
XRCC1P18887 AP002884.5-201ENST00000595053 1132 ntBASIC4.93□□□□□ -1.62
XRCC1P18887 AC138473.1-201ENST00000605717 526 ntBASIC4.93□□□□□ -1.62
XRCC1P18887 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.93□□□□□ -1.62
XRCC1P18887 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.93□□□□□ -1.62
XRCC1P18887 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.93□□□□□ -1.62
XRCC1P18887 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.93□□□□□ -1.62
XRCC1P18887 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.93□□□□□ -1.62
XRCC1P18887 TMEM30CP-203ENST00000637814 1035 ntBASIC4.93□□□□□ -1.62
XRCC1P18887 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
XRCC1P18887 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
XRCC1P18887 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.93□□□□□ -1.62
XRCC1P18887 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms