Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNA1P02708 MIR6853-201ENST00000619642 74 ntBASIC5.4□□□□□ -1.54
CHRNA1P02708 AC012414.7-202ENST00000622705 1090 ntBASIC5.4□□□□□ -1.54
CHRNA1P02708 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.4□□□□□ -1.54
CHRNA1P02708 CR381572.2-201ENST00000624852 397 ntBASIC5.4□□□□□ -1.54
CHRNA1P02708 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.4□□□□□ -1.54
CHRNA1P02708 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNA1P02708 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNA1P02708 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNA1P02708 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNA1P02708 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CHRNA1P02708 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.39□□□□□ -1.55
CHRNA1P02708 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA1P02708 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA1P02708 OR9K1P-202ENST00000641111 3217 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNA1P02708 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA1P02708 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.39□□□□□ -1.55
CHRNA1P02708 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.39□□□□□ -1.55
CHRNA1P02708 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA1P02708 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNA1P02708 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA1P02708 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA1P02708 MIR137-201ENST00000385223 102 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 MIR298-201ENST00000401212 88 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 AL357515.1-201ENST00000402967 542 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNA1P02708 AL358178.1-201ENST00000407698 397 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 GPS2P1-201ENST00000411761 986 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.39□□□□□ -1.55
CHRNA1P02708 TBCAP2-201ENST00000416175 326 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 BX510359.2-201ENST00000417920 305 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 EIF2S2P3-201ENST00000428356 999 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 GSTA7P-201ENST00000438425 448 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.39□□□□□ -1.55
CHRNA1P02708 AC012512.1-201ENST00000446594 718 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.39□□□□□ -1.55
CHRNA1P02708 GAPDHP14-201ENST00000450472 937 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 CYCSP42-201ENST00000450823 238 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 AL691482.1-201ENST00000453255 87 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNA1P02708 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNA1P02708 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA1P02708 AC025423.2-201ENST00000537570 439 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 NDUFB4P11-201ENST00000560510 395 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.39□□□□□ -1.55
CHRNA1P02708 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.39□□□□□ -1.55
CHRNA1P02708 MIR5096-201ENST00000583713 70 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 VN1R81P-201ENST00000602085 372 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 AC098935.2-201ENST00000604222 466 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 AC012557.1-201ENST00000607115 611 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNA1P02708 AC138965.3-201ENST00000623875 498 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA1P02708 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
CHRNA1P02708 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CHRNA1P02708 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.39□□□□□ -1.55
CHRNA1P02708 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.39□□□□□ -1.55
CHRNA1P02708 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNA1P02708 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.39□□□□□ -1.55
CHRNA1P02708 NCLP2-201ENST00000416078 1462 ntBASIC5.39□□□□□ -1.55
CHRNA1P02708 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA1P02708 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CHRNA1P02708 AC092376.2-201ENST00000622621 4116 ntBASIC5.38□□□□□ -1.55
CHRNA1P02708 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.38□□□□□ -1.55
CHRNA1P02708 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA1P02708 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA1P02708 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA1P02708 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA1P02708 AL132640.2-201ENST00000559968 1698 ntBASIC5.38□□□□□ -1.55
CHRNA1P02708 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA1P02708 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.38□□□□□ -1.55
CHRNA1P02708 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA1P02708 U3.32-201ENST00000408116 212 ntBASIC5.38□□□□□ -1.55
CHRNA1P02708 COX6CP17-201ENST00000421389 185 ntBASIC5.38□□□□□ -1.55
CHRNA1P02708 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.38□□□□□ -1.55
CHRNA1P02708 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.38□□□□□ -1.55
CHRNA1P02708 SCAND3P1-201ENST00000439854 1060 ntBASIC5.38□□□□□ -1.55
CHRNA1P02708 OR52Y1P-201ENST00000452418 828 ntBASIC5.38□□□□□ -1.55
CHRNA1P02708 snoU13.1-201ENST00000459157 104 ntBASIC5.38□□□□□ -1.55
CHRNA1P02708 RPS17P2-201ENST00000461663 408 ntBASIC5.38□□□□□ -1.55
CHRNA1P02708 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.38□□□□□ -1.55
CHRNA1P02708 AC116562.1-201ENST00000485355 781 ntBASIC5.38□□□□□ -1.55
CHRNA1P02708 RFPL4AP3-201ENST00000515267 345 ntBASIC5.38□□□□□ -1.55
CHRNA1P02708 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.38□□□□□ -1.55
CHRNA1P02708 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.38□□□□□ -1.55
CHRNA1P02708 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.38□□□□□ -1.55
CHRNA1P02708 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.38□□□□□ -1.55
CHRNA1P02708 AC083809.1-201ENST00000615051 472 ntBASIC5.38□□□□□ -1.55
CHRNA1P02708 AC091932.2-201ENST00000623014 291 ntBASIC5.38□□□□□ -1.55
CHRNA1P02708 AC021106.3-201ENST00000623925 531 ntBASIC5.38□□□□□ -1.55
CHRNA1P02708 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.38□□□□□ -1.55
CHRNA1P02708 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.38□□□□□ -1.55
CHRNA1P02708 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CHRNA1P02708 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.38□□□□□ -1.55
CHRNA1P02708 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA1P02708 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA1P02708 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA1P02708 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms