Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC119751.5-201ENST00000514077 770 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 AC016550.3-201ENST00000515706 767 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.45□□□□□ -1.7
SPTA1P02549 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.45□□□□□ -1.7
SPTA1P02549 AC011471.1-201ENST00000585766 187 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.45□□□□□ -1.7
SPTA1P02549 AC091953.5-201ENST00000622919 233 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.45□□□□□ -1.7
SPTA1P02549 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.45□□□□□ -1.7
SPTA1P02549 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
SPTA1P02549 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SPTA1P02549 AC112198.2-201ENST00000426589 6996 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.45□□□□□ -1.7
SPTA1P02549 AC007618.1-201ENST00000366455 732 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 SNORA2.3-201ENST00000383920 135 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 RPL23AP17-201ENST00000401064 499 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.45□□□□□ -1.7
SPTA1P02549 AC092647.1-201ENST00000420654 287 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.45□□□□□ -1.7
SPTA1P02549 NRBF2P3-201ENST00000432731 865 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC4.45□□□□□ -1.7
SPTA1P02549 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.45□□□□□ -1.7
SPTA1P02549 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.45□□□□□ -1.7
SPTA1P02549 AC106785.1-201ENST00000565935 262 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 AGGF1P6-201ENST00000569213 976 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 AC019322.1-201ENST00000571869 389 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.45□□□□□ -1.7
SPTA1P02549 CYCSP1-201ENST00000604815 315 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 AL591034.3-201ENST00000605511 685 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SPTA1P02549 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SPTA1P02549 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SPTA1P02549 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SPTA1P02549 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SPTA1P02549 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SPTA1P02549 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.45□□□□□ -1.7
SPTA1P02549 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SPTA1P02549 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPTA1P02549 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPTA1P02549 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.44□□□□□ -1.7
SPTA1P02549 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPTA1P02549 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.44□□□□□ -1.7
SPTA1P02549 RRM2P4-201ENST00000441721 562 ntBASIC4.44□□□□□ -1.7
SPTA1P02549 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.44□□□□□ -1.7
SPTA1P02549 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.44□□□□□ -1.7
SPTA1P02549 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.44□□□□□ -1.7
SPTA1P02549 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
SPTA1P02549 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.44□□□□□ -1.7
SPTA1P02549 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.44□□□□□ -1.7
SPTA1P02549 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.44□□□□□ -1.7
SPTA1P02549 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.44□□□□□ -1.7
SPTA1P02549 AL683813.2-201ENST00000605245 502 ntBASIC4.44□□□□□ -1.7
SPTA1P02549 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPTA1P02549 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPTA1P02549 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.44□□□□□ -1.7
SPTA1P02549 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SPTA1P02549 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPTA1P02549 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SPTA1P02549 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPTA1P02549 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPTA1P02549 SNORA62.3-201ENST00000365110 153 ntBASIC4.44□□□□□ -1.7
SPTA1P02549 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
SPTA1P02549 AL645608.4-201ENST00000423619 154 ntBASIC4.44□□□□□ -1.7
SPTA1P02549 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.44□□□□□ -1.7
SPTA1P02549 YME1L1P1-201ENST00000429435 297 ntBASIC4.44□□□□□ -1.7
SPTA1P02549 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC4.44□□□□□ -1.7
SPTA1P02549 RPS5P7-201ENST00000456664 608 ntBASIC4.44□□□□□ -1.7
SPTA1P02549 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC4.44□□□□□ -1.7
SPTA1P02549 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.44□□□□□ -1.7
SPTA1P02549 RN7SL802P-201ENST00000577858 299 ntBASIC4.44□□□□□ -1.7
SPTA1P02549 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.44□□□□□ -1.7
SPTA1P02549 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC4.44□□□□□ -1.7
SPTA1P02549 RPL7P50-201ENST00000600588 727 ntBASIC4.44□□□□□ -1.7
SPTA1P02549 AL353729.2-201ENST00000605859 1249 ntBASIC4.44□□□□□ -1.7
SPTA1P02549 AC244107.2-201ENST00000611773 76 ntBASIC4.44□□□□□ -1.7
SPTA1P02549 AC015712.7-201ENST00000615211 635 ntBASIC4.44□□□□□ -1.7
SPTA1P02549 CDRT1-208ENST00000630868 794 ntBASIC4.44□□□□□ -1.7
SPTA1P02549 AC108751.5-201ENST00000492880 1336 ntBASIC4.44□□□□□ -1.7
SPTA1P02549 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SPTA1P02549 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC4.44□□□□□ -1.7
SPTA1P02549 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPTA1P02549 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SPTA1P02549 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.43□□□□□ -1.7
SPTA1P02549 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC4.43□□□□□ -1.7
SPTA1P02549 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
SPTA1P02549 SNORA9-201ENST00000384215 133 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 MIR589-201ENST00000385238 99 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 UQCRBP1-201ENST00000421129 336 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 RPL34P27-201ENST00000428810 349 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 AL390879.1-201ENST00000439143 386 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 RPS12P31-201ENST00000491419 398 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.43□□□□□ -1.7
SPTA1P02549 AC096754.1-201ENST00000508904 818 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 AC008958.1-201ENST00000511047 682 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.43□□□□□ -1.7
SPTA1P02549 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.43□□□□□ -1.7
SPTA1P02549 AC107016.1-201ENST00000550463 337 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 MIR492-201ENST00000638676 116 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SPTA1P02549 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms