Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.6□□□□□ -1.51
COL2A1P02458 AL133338.2-201ENST00000604292 736 ntBASIC5.6□□□□□ -1.51
COL2A1P02458 AP000648.2-201ENST00000624182 404 ntBASIC5.6□□□□□ -1.51
COL2A1P02458 AC010480.1-201ENST00000624823 684 ntBASIC5.6□□□□□ -1.51
COL2A1P02458 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL2A1P02458 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
COL2A1P02458 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL2A1P02458 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL2A1P02458 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.6□□□□□ -1.51
COL2A1P02458 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL2A1P02458 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL2A1P02458 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL2A1P02458 AP001029.2-203ENST00000589795 4910 ntBASIC5.6□□□□□ -1.51
COL2A1P02458 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL2A1P02458 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL2A1P02458 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL2A1P02458 AC093671.1-201ENST00000624981 2929 ntBASIC5.6□□□□□ -1.51
COL2A1P02458 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.59□□□□□ -1.51
COL2A1P02458 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
COL2A1P02458 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL2A1P02458 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.51
COL2A1P02458 UQCRBP1-201ENST00000421129 336 ntBASIC5.59□□□□□ -1.51
COL2A1P02458 AC023141.6-201ENST00000429418 337 ntBASIC5.59□□□□□ -1.51
COL2A1P02458 RPL5P2-201ENST00000429598 854 ntBASIC5.59□□□□□ -1.51
COL2A1P02458 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.59□□□□□ -1.51
COL2A1P02458 AL162591.2-201ENST00000449634 317 ntBASIC5.59□□□□□ -1.51
COL2A1P02458 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.59□□□□□ -1.51
COL2A1P02458 AC007688.1-201ENST00000475592 759 ntBASIC5.59□□□□□ -1.51
COL2A1P02458 AC105031.1-201ENST00000518550 476 ntBASIC5.59□□□□□ -1.51
COL2A1P02458 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.59□□□□□ -1.51
COL2A1P02458 AC093249.4-201ENST00000564755 259 ntBASIC5.59□□□□□ -1.51
COL2A1P02458 AL356218.2-201ENST00000605264 187 ntBASIC5.59□□□□□ -1.51
COL2A1P02458 MIR6716-201ENST00000613413 80 ntBASIC5.59□□□□□ -1.51
COL2A1P02458 AL121873.1-201ENST00000616013 524 ntBASIC5.59□□□□□ -1.51
COL2A1P02458 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL2A1P02458 OR8B1P-202ENST00000641132 1178 ntBASIC5.59□□□□□ -1.51
COL2A1P02458 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
COL2A1P02458 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
COL2A1P02458 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.59□□□□□ -1.51
COL2A1P02458 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL2A1P02458 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.59□□□□□ -1.51
COL2A1P02458 ZNF137P-201ENST00000456718 1920 ntBASIC5.59□□□□□ -1.51
COL2A1P02458 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL2A1P02458 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
COL2A1P02458 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
COL2A1P02458 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
COL2A1P02458 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL2A1P02458 RNU4-39P-201ENST00000362455 127 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 SNORA37-201ENST00000384504 129 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 U3.22-201ENST00000391120 215 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.58□□□□□ -1.52
COL2A1P02458 RPEP3-201ENST00000425462 676 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 CENPIP1-201ENST00000425713 902 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 RPL35AP21-201ENST00000437667 333 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.58□□□□□ -1.52
COL2A1P02458 ARL2BPP10-201ENST00000446487 531 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COL2A1P02458 MYL12BP2-201ENST00000503948 512 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.58□□□□□ -1.52
COL2A1P02458 AL157762.1-201ENST00000619612 415 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.58□□□□□ -1.52
COL2A1P02458 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL2A1P02458 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.58□□□□□ -1.52
COL2A1P02458 CCAT2-201ENST00000630920 1752 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL2A1P02458 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL2A1P02458 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL2A1P02458 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
COL2A1P02458 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COL2A1P02458 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL2A1P02458 SNORA71.2-201ENST00000364941 134 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 AL590762.2-201ENST00000395798 571 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 AL050305.1-201ENST00000399993 1230 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.58□□□□□ -1.52
COL2A1P02458 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.58□□□□□ -1.52
COL2A1P02458 AL158073.1-201ENST00000426848 1104 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 RPL12P28-201ENST00000430852 489 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 H2AFZP5-201ENST00000446960 382 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 AL359073.1-201ENST00000448036 403 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.58□□□□□ -1.52
COL2A1P02458 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.58□□□□□ -1.52
COL2A1P02458 AC013356.1-201ENST00000489027 564 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 AC007016.1-201ENST00000512110 244 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 AC138701.1-201ENST00000524329 714 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 AP001781.1-201ENST00000530977 207 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.58□□□□□ -1.52
COL2A1P02458 RN7SL652P-201ENST00000577769 300 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 KPNA2P3-201ENST00000584190 848 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC5.58□□□□□ -1.52
COL2A1P02458 AC026790.2-201ENST00000606282 430 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 AC100847.1-201ENST00000611316 481 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.58□□□□□ -1.52
COL2A1P02458 U3.53-201ENST00000628922 216 ntBASIC5.58□□□□□ -1.52
COL2A1P02458 AC139713.2-214ENST00000642059 1811 ntBASIC5.57□□□□□ -1.52
COL2A1P02458 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
COL2A1P02458 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL2A1P02458 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL2A1P02458 ADAM24P-201ENST00000398655 2101 ntBASIC5.57□□□□□ -1.52
COL2A1P02458 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms