Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 SNORA70H-201ENST00000383910 135 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 SNORA70J-201ENST00000384182 135 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 RPL7P57-201ENST00000423238 740 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 RPL12P28-201ENST00000430852 489 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 AL512637.2-201ENST00000431287 1256 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 LINC02210-201ENST00000444561 288 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 MOB1AP2-201ENST00000446060 614 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RAPGEF3O95398 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC7.58□□□□□ -1.2
RAPGEF3O95398 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC7.58□□□□□ -1.2
RAPGEF3O95398 MTND2P28-201ENST00000457540 1044 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.58□□□□□ -1.2
RAPGEF3O95398 RN7SL443P-201ENST00000464331 290 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 RPL7AP10-201ENST00000481016 791 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 AC016687.1-201ENST00000482574 353 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC7.58□□□□□ -1.2
RAPGEF3O95398 OR9N1P-202ENST00000494289 481 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 AC097173.1-201ENST00000505862 819 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.58□□□□□ -1.2
RAPGEF3O95398 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC7.58□□□□□ -1.2
RAPGEF3O95398 AC103833.1-201ENST00000517442 172 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 NPM1P6-201ENST00000521088 871 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 OSBPL9P3-201ENST00000534523 595 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC7.58□□□□□ -1.2
RAPGEF3O95398 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC7.58□□□□□ -1.2
RAPGEF3O95398 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC7.58□□□□□ -1.2
RAPGEF3O95398 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
RAPGEF3O95398 OOSP1P2-201ENST00000579644 351 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RAPGEF3O95398 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RAPGEF3O95398 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC7.58□□□□□ -1.2
RAPGEF3O95398 AP000770.2-201ENST00000623694 100 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 AC097520.1-201ENST00000624435 385 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC7.58□□□□□ -1.2
RAPGEF3O95398 AC016251.2-201ENST00000623393 3089 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
RAPGEF3O95398 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.58□□□□□ -1.2
RAPGEF3O95398 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC7.58□□□□□ -1.2
RAPGEF3O95398 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RAPGEF3O95398 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
RAPGEF3O95398 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RAPGEF3O95398 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RAPGEF3O95398 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RAPGEF3O95398 AC009501.3-201ENST00000605001 1352 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
RAPGEF3O95398 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RAPGEF3O95398 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.57□□□□□ -1.2
RAPGEF3O95398 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
RAPGEF3O95398 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC7.57□□□□□ -1.2
RAPGEF3O95398 MSL3P1-202ENST00000440028 1468 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RAPGEF3O95398 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RAPGEF3O95398 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RAPGEF3O95398 MAPK10-338ENST00000641647 3362 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 RNA5SP28-201ENST00000363841 119 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 ST13P16-201ENST00000401760 781 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 SNORA77-201ENST00000408716 125 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 AC098592.2-201ENST00000413158 265 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 GAS5-208ENST00000425771 242 ntTSL 3 BASIC7.57□□□□□ -1.2
RAPGEF3O95398 MRPL50P1-201ENST00000431951 384 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 AL161722.2-201ENST00000434731 981 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 CBX1P1-201ENST00000440184 427 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 AC073465.2-201ENST00000440938 498 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 SNORA84-201ENST00000459229 133 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RAPGEF3O95398 AC091167.1-201ENST00000492017 396 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 RPSAP51-201ENST00000497462 645 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 TRAV31-201ENST00000502780 342 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 ENPP7P9-201ENST00000514456 627 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 AC034244.2-201ENST00000514668 858 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC7.57□□□□□ -1.2
RAPGEF3O95398 OR8X1P-201ENST00000534542 869 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC7.57□□□□□ -1.2
RAPGEF3O95398 AC233266.2-201ENST00000567067 528 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 MIR4429-201ENST00000580105 73 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC7.57□□□□□ -1.2
RAPGEF3O95398 AC068313.1-201ENST00000604028 1008 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 OR51C1P-201ENST00000608504 942 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 AC025016.1-201ENST00000616746 682 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 AL356118.1-201ENST00000635272 1078 ntBASIC7.57□□□□□ -1.2
RAPGEF3O95398 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC7.57□□□□□ -1.2
RAPGEF3O95398 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RAPGEF3O95398 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
RAPGEF3O95398 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC7.57□□□□□ -1.2
RAPGEF3O95398 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RAPGEF3O95398 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.57□□□□□ -1.2
RAPGEF3O95398 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RAPGEF3O95398 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.57□□□□□ -1.2
RAPGEF3O95398 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RAPGEF3O95398 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
RAPGEF3O95398 AC097063.1-201ENST00000426714 1797 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7.56□□□□□ -1.2
RAPGEF3O95398 AC083899.1-201ENST00000454465 3819 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RAPGEF3O95398 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
RAPGEF3O95398 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RAPGEF3O95398 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RAPGEF3O95398 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RAPGEF3O95398 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC7.56□□□□□ -1.2
RAPGEF3O95398 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms