Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RN7SKP59-201ENST00000410520 314 ntBASIC3.79□□□□□ -1.8
SSSCA1O60232 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.79□□□□□ -1.8
SSSCA1O60232 AC004690.1-201ENST00000418216 328 ntBASIC3.79□□□□□ -1.8
SSSCA1O60232 LINC00993-201ENST00000420453 540 ntBASIC3.79□□□□□ -1.8
SSSCA1O60232 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC3.79□□□□□ -1.8
SSSCA1O60232 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.79□□□□□ -1.8
SSSCA1O60232 AL163193.1-201ENST00000444895 788 ntBASIC3.79□□□□□ -1.8
SSSCA1O60232 AC073109.1-201ENST00000445066 978 ntBASIC3.79□□□□□ -1.8
SSSCA1O60232 RPS27AP15-201ENST00000447672 466 ntBASIC3.79□□□□□ -1.8
SSSCA1O60232 AL645937.3-201ENST00000453647 936 ntBASIC3.79□□□□□ -1.8
SSSCA1O60232 AC084754.1-201ENST00000463466 464 ntBASIC3.79□□□□□ -1.8
SSSCA1O60232 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC3.79□□□□□ -1.8
SSSCA1O60232 RN7SL222P-201ENST00000476452 299 ntBASIC3.79□□□□□ -1.8
SSSCA1O60232 NIP7P2-201ENST00000485801 544 ntBASIC3.79□□□□□ -1.8
SSSCA1O60232 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC3.79□□□□□ -1.8
SSSCA1O60232 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.79□□□□□ -1.8
SSSCA1O60232 BX510359.5-201ENST00000515651 304 ntBASIC3.79□□□□□ -1.8
SSSCA1O60232 RNA5SP473-201ENST00000516402 125 ntBASIC3.79□□□□□ -1.8
SSSCA1O60232 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.79□□□□□ -1.8
SSSCA1O60232 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.79□□□□□ -1.8
SSSCA1O60232 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.79□□□□□ -1.8
SSSCA1O60232 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SSSCA1O60232 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SSSCA1O60232 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.79□□□□□ -1.8
SSSCA1O60232 AC008759.1-201ENST00000589783 983 ntBASIC3.79□□□□□ -1.8
SSSCA1O60232 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.79□□□□□ -1.8
SSSCA1O60232 AC124856.1-201ENST00000600819 896 ntBASIC3.79□□□□□ -1.8
SSSCA1O60232 MIR6780B-201ENST00000610307 79 ntBASIC3.79□□□□□ -1.8
SSSCA1O60232 MIR7154-201ENST00000620673 73 ntBASIC3.79□□□□□ -1.8
SSSCA1O60232 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC3.79□□□□□ -1.8
SSSCA1O60232 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SSSCA1O60232 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.79□□□□□ -1.8
SSSCA1O60232 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSSCA1O60232 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC3.79□□□□□ -1.8
SSSCA1O60232 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSSCA1O60232 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SSSCA1O60232 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSSCA1O60232 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
SSSCA1O60232 MAPK10-304ENST00000641341 3984 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSSCA1O60232 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSSCA1O60232 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SSSCA1O60232 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSSCA1O60232 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC3.78□□□□□ -1.8
SSSCA1O60232 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSSCA1O60232 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSSCA1O60232 RN7SKP115-201ENST00000363177 317 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 RNA5SP455-201ENST00000365190 119 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC3.78□□□□□ -1.8
SSSCA1O60232 AL356968.2-201ENST00000412769 1257 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SSSCA1O60232 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.78□□□□□ -1.8
SSSCA1O60232 CENPIP1-201ENST00000425713 902 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 RPL21P91-201ENST00000429231 479 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 DYNLL1P7-201ENST00000429273 258 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SSSCA1O60232 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.78□□□□□ -1.8
SSSCA1O60232 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC3.78□□□□□ -1.8
SSSCA1O60232 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SSSCA1O60232 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.78□□□□□ -1.8
SSSCA1O60232 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.78□□□□□ -1.8
SSSCA1O60232 RPL31P15-201ENST00000449770 338 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 PSMC1P13-201ENST00000458195 985 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 NDUFA5P5-201ENST00000468361 342 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.78□□□□□ -1.8
SSSCA1O60232 RPL7P39-201ENST00000481157 744 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SSSCA1O60232 AC113430.1-201ENST00000506872 718 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.78□□□□□ -1.8
SSSCA1O60232 PPBPP1-201ENST00000510807 373 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 RNA5SP446-201ENST00000515955 82 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 AC008694.2-201ENST00000517591 306 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 AC090151.1-201ENST00000520784 730 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.78□□□□□ -1.8
SSSCA1O60232 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SSSCA1O60232 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC3.78□□□□□ -1.8
SSSCA1O60232 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC3.78□□□□□ -1.8
SSSCA1O60232 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.78□□□□□ -1.8
SSSCA1O60232 AC073137.1-201ENST00000605636 634 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 OR7A19P-201ENST00000608051 733 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 AC244517.3-201ENST00000616254 1235 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 MIR6837-201ENST00000620884 64 ntBASIC3.78□□□□□ -1.8
SSSCA1O60232 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSSCA1O60232 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.78□□□□□ -1.8
SSSCA1O60232 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SSSCA1O60232 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.81
SSSCA1O60232 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
SSSCA1O60232 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
SSSCA1O60232 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.78□□□□□ -1.81
SSSCA1O60232 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.77□□□□□ -1.81
SSSCA1O60232 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
SSSCA1O60232 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSSCA1O60232 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSSCA1O60232 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SSSCA1O60232 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SSSCA1O60232 AC099654.2-201ENST00000433031 1980 ntBASIC3.77□□□□□ -1.81
SSSCA1O60232 SNURFL-201ENST00000309296 343 ntBASIC3.77□□□□□ -1.81
SSSCA1O60232 AC067945.1-201ENST00000342609 618 ntBASIC3.77□□□□□ -1.81
SSSCA1O60232 RNA5SP428-201ENST00000365129 132 ntBASIC3.77□□□□□ -1.81
SSSCA1O60232 RNU1-82P-201ENST00000390851 165 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms