Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LDB2O43679 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.23□□□□□ -1.57
LDB2O43679 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LDB2O43679 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LDB2O43679 AL590763.1-201ENST00000398297 1545 ntBASIC5.23□□□□□ -1.57
LDB2O43679 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LDB2O43679 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LDB2O43679 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
LDB2O43679 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
LDB2O43679 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LDB2O43679 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LDB2O43679 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
LDB2O43679 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.23□□□□□ -1.57
LDB2O43679 SNORD65-201ENST00000391079 73 ntBASIC5.23□□□□□ -1.57
LDB2O43679 OR8V1P-201ENST00000395193 873 ntBASIC5.23□□□□□ -1.57
LDB2O43679 MTCO2P8-201ENST00000412213 658 ntBASIC5.23□□□□□ -1.57
LDB2O43679 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.23□□□□□ -1.57
LDB2O43679 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.23□□□□□ -1.57
LDB2O43679 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.23□□□□□ -1.57
LDB2O43679 AC108075.1-201ENST00000424692 529 ntBASIC5.23□□□□□ -1.57
LDB2O43679 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.23□□□□□ -1.57
LDB2O43679 AL161722.2-201ENST00000434731 981 ntBASIC5.23□□□□□ -1.57
LDB2O43679 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.23□□□□□ -1.57
LDB2O43679 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.23□□□□□ -1.57
LDB2O43679 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.23□□□□□ -1.57
LDB2O43679 BX842559.2-201ENST00000451418 605 ntBASIC5.23□□□□□ -1.57
LDB2O43679 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.23□□□□□ -1.57
LDB2O43679 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LDB2O43679 COPS8P2-201ENST00000473228 627 ntBASIC5.23□□□□□ -1.57
LDB2O43679 SETP6-201ENST00000479329 568 ntBASIC5.23□□□□□ -1.57
LDB2O43679 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.23□□□□□ -1.57
LDB2O43679 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.23□□□□□ -1.57
LDB2O43679 AC024558.1-201ENST00000505008 528 ntBASIC5.23□□□□□ -1.57
LDB2O43679 AC096571.1-202ENST00000506634 735 ntBASIC5.23□□□□□ -1.57
LDB2O43679 HIGD1AP14-201ENST00000507617 282 ntBASIC5.23□□□□□ -1.57
LDB2O43679 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.23□□□□□ -1.57
LDB2O43679 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.23□□□□□ -1.57
LDB2O43679 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LDB2O43679 CIR1P1-201ENST00000524055 1133 ntBASIC5.23□□□□□ -1.57
LDB2O43679 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.23□□□□□ -1.57
LDB2O43679 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LDB2O43679 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.23□□□□□ -1.57
LDB2O43679 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LDB2O43679 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.23□□□□□ -1.57
LDB2O43679 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.23□□□□□ -1.57
LDB2O43679 AF230666.2-201ENST00000602328 725 ntBASIC5.23□□□□□ -1.57
LDB2O43679 AC026741.1-201ENST00000605892 482 ntBASIC5.23□□□□□ -1.57
LDB2O43679 AL512329.2-201ENST00000607350 548 ntBASIC5.23□□□□□ -1.57
LDB2O43679 AL121652.1-201ENST00000608851 448 ntBASIC5.23□□□□□ -1.57
LDB2O43679 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.23□□□□□ -1.57
LDB2O43679 AC118658.2-201ENST00000618697 459 ntBASIC5.23□□□□□ -1.57
LDB2O43679 RMST_5.1-201ENST00000618704 126 ntBASIC5.23□□□□□ -1.57
LDB2O43679 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.23□□□□□ -1.57
LDB2O43679 AC097655.1-201ENST00000635075 318 ntBASIC5.23□□□□□ -1.57
LDB2O43679 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.23□□□□□ -1.57
LDB2O43679 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.23□□□□□ -1.57
LDB2O43679 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LDB2O43679 OR5AC4P-202ENST00000642086 985 ntBASIC5.23□□□□□ -1.57
LDB2O43679 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LDB2O43679 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LDB2O43679 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LDB2O43679 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LDB2O43679 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LDB2O43679 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
LDB2O43679 AC092376.2-201ENST00000622621 4116 ntBASIC5.23□□□□□ -1.57
LDB2O43679 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.23□□□□□ -1.57
LDB2O43679 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.23□□□□□ -1.57
LDB2O43679 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LDB2O43679 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LDB2O43679 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LDB2O43679 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LDB2O43679 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.22□□□□□ -1.57
LDB2O43679 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LDB2O43679 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LDB2O43679 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.22□□□□□ -1.57
LDB2O43679 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.22□□□□□ -1.57
LDB2O43679 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LDB2O43679 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LDB2O43679 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LDB2O43679 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.22□□□□□ -1.57
LDB2O43679 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.22□□□□□ -1.57
LDB2O43679 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LDB2O43679 AC007618.1-201ENST00000366455 732 ntBASIC5.22□□□□□ -1.57
LDB2O43679 MIR223-201ENST00000385204 110 ntBASIC5.22□□□□□ -1.57
LDB2O43679 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LDB2O43679 SPTLC1P2-201ENST00000407089 121 ntBASIC5.22□□□□□ -1.57
LDB2O43679 AL158050.1-201ENST00000416077 457 ntBASIC5.22□□□□□ -1.57
LDB2O43679 RPS4XP16-201ENST00000427198 791 ntBASIC5.22□□□□□ -1.57
LDB2O43679 GAPDHP58-201ENST00000438477 1006 ntBASIC5.22□□□□□ -1.57
LDB2O43679 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.22□□□□□ -1.57
LDB2O43679 Z92846.1-201ENST00000456203 268 ntBASIC5.22□□□□□ -1.57
LDB2O43679 snoU109.3-201ENST00000459477 145 ntBASIC5.22□□□□□ -1.57
LDB2O43679 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.22□□□□□ -1.57
LDB2O43679 PPM1AP1-201ENST00000502740 1135 ntBASIC5.22□□□□□ -1.57
LDB2O43679 PRELID3BP6-201ENST00000503839 571 ntBASIC5.22□□□□□ -1.57
LDB2O43679 AC012400.1-201ENST00000518452 381 ntBASIC5.22□□□□□ -1.57
LDB2O43679 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.22□□□□□ -1.57
LDB2O43679 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.22□□□□□ -1.57
LDB2O43679 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.22□□□□□ -1.57
LDB2O43679 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 182.6 ms