Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RPL23AP25-201ENST00000430973 463 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 GSTM5P1-201ENST00000434751 660 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 ELOCP8-201ENST00000439309 332 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 ELOCP15-201ENST00000442090 332 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AL590004.3-202ENST00000445883 451 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 HMGB3P21-201ENST00000452483 547 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC108161.1-201ENST00000461060 402 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 RN7SL571P-201ENST00000468302 295 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC098847.1-201ENST00000473094 348 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC090142.2-201ENST00000483263 416 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC090013.1-201ENST00000485147 480 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 PDPN-205ENST00000487038 607 ntTSL 2 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 RPL34P29-201ENST00000491411 325 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC009120.1-201ENST00000493458 473 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC008868.1-201ENST00000509786 737 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 PRMT5P1-201ENST00000514351 598 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 RN7SKP5-201ENST00000517045 272 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 OR5M7P-201ENST00000526140 972 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC103855.4-201ENST00000533158 265 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC116553.2-201ENST00000564203 463 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC005244.1-201ENST00000582566 339 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC005495.1-201ENST00000586611 1211 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 EXOSC3P2-201ENST00000594464 497 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AL049634.3-201ENST00000604968 457 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AL390877.1-201ENST00000605704 214 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC116447.1-201ENST00000613153 453 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AL122023.1-201ENST00000622847 530 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC2.59□□□□□ -2
CHKB-CPT1BH3BT56 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CHKB-CPT1BH3BT56 ST7-221ENST00000465133 2155 ntTSL 5 BASIC2.59□□□□□ -2
CHKB-CPT1BH3BT56 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC008549.2-201ENST00000333482 706 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC067945.1-201ENST00000342609 618 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 Z98941.1-201ENST00000407764 100 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AL022331.1-201ENST00000429025 477 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 GSTA7P-201ENST00000438425 448 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 RPS29P10-201ENST00000439197 166 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 ELOCP10-201ENST00000440624 327 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 RPS10P14-201ENST00000440748 502 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC239800.1-201ENST00000442049 719 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AL136097.1-201ENST00000456945 913 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 CEACAMP4-201ENST00000457676 421 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 RBMY2HP-201ENST00000457961 720 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 RNU7-170P-201ENST00000459303 61 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 ATP5G1P3-201ENST00000463301 410 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 SEPT7P6-201ENST00000469999 1143 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AL122020.1-201ENST00000472287 459 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 RPS17P15-201ENST00000475609 349 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 RPS18P6-201ENST00000476880 458 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC097173.1-201ENST00000505862 819 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms