Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 RNU4-4P-201ENST00000364588 130 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 RN7SKP153-201ENST00000365026 316 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 MTND2P11-201ENST00000423638 648 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 RPS27AP6-201ENST00000427962 448 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 AL157827.1-201ENST00000447622 132 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 CABYRP1-201ENST00000465493 1045 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 BX284632.1-201ENST00000478218 541 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 AC090114.3-201ENST00000479267 829 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 AC058823.1-201ENST00000485315 474 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 CDH12P2-201ENST00000504393 298 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 AC021193.1-201ENST00000511607 420 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 AL671862.1-201ENST00000515851 349 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 AC022360.1-201ENST00000521058 340 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 EIF4A2P5-201ENST00000529914 499 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 OR4A43P-201ENST00000532938 908 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 MIR4675-201ENST00000577898 77 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 MIR4436B2-201ENST00000581415 91 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 MIR4436B1-201ENST00000583272 91 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 AC116651.1-201ENST00000609724 556 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 AL162574.1-201ENST00000615702 950 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 CFTRP2-201ENST00000634304 199 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 TTC39DP-201ENST00000416781 1688 ntBASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.77□□□□□ -1.65
NPIPA3F8WFD2 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 AL121950.1-201ENST00000624993 2077 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 RN7SKP103-201ENST00000363848 320 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 MIR585-201ENST00000384887 94 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 AL133270.1-201ENST00000402635 279 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 OR6C64P-201ENST00000419708 825 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 RPL17P35-201ENST00000432217 549 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 VN1R54P-201ENST00000435210 1049 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 PSMD10P3-201ENST00000437000 448 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 CACYBPP1-201ENST00000438592 684 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 AC016772.1-201ENST00000444170 1261 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 AC079168.1-201ENST00000458741 345 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 AC025768.1-201ENST00000510057 267 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 RN7SKP147-201ENST00000517154 244 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 HIGD1AP18-201ENST00000520730 278 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 AC013701.1-201ENST00000522657 465 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 AP000676.2-201ENST00000529711 301 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 AC023158.1-201ENST00000561632 1025 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 OR1F2P-201ENST00000570470 933 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 AC019322.1-201ENST00000571869 389 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 AC010503.3-201ENST00000594355 540 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 AC009597.2-201ENST00000604659 592 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 RPL21P136-201ENST00000605378 396 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 AL136295.6-201ENST00000610486 658 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 AC025016.1-201ENST00000616746 682 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms