Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AL121834.1-201ENST00000572284 509 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 AC015922.4-201ENST00000612568 690 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 AL356274.1-201ENST00000617064 410 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 AC131238.1-201ENST00000617135 328 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 MIR7154-201ENST00000620673 73 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AL356317.1-201ENST00000396110 1436 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AC114786.1-201ENST00000512892 1415 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 RN7SKP113-201ENST00000363891 295 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 RNU4-7P-201ENST00000364758 141 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 RNA5SP122-201ENST00000384457 108 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 OR7E101P-201ENST00000400428 513 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AL080315.1-201ENST00000406055 466 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 MIR1203-201ENST00000408812 85 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 EEF1B2P8-201ENST00000414101 671 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 RAB28P3-201ENST00000448325 597 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 OR6C72P-201ENST00000451403 892 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 RPS17P2-201ENST00000461663 408 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AC006967.1-201ENST00000467608 589 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AC109481.1-201ENST00000509173 282 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 RNA5SP228-201ENST00000516232 133 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AC012400.1-201ENST00000518452 381 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AC078878.1-201ENST00000539832 958 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AC068305.2-201ENST00000550567 1205 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AL133406.3-201ENST00000606817 541 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AP005131.7-201ENST00000610087 611 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 DDX18P3-201ENST00000404856 2007 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 CASC19-281ENST00000642118 1554 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 MTND4P26-201ENST00000415971 1359 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 HSPD1P14-201ENST00000432666 1618 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 AC092747.4-201ENST00000620519 1861 ntBASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.88□□□□□ -1.79
RBFOX3A6NFN3 OR10AB1P-202ENST00000641219 1686 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AL450326.2-201ENST00000421913 1962 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 MIR921-201ENST00000401133 56 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 HMGB1P20-201ENST00000402555 677 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AL133388.1-201ENST00000404509 287 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 OR4K12P-201ENST00000406538 961 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC009302.1-201ENST00000417147 390 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC093084.1-201ENST00000424233 687 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC011753.3-201ENST00000443436 406 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 RPL31P15-201ENST00000449770 338 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AP006222.1-205ENST00000450734 457 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 LDHBP2-201ENST00000456969 1005 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms