Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 HSPE1P2-201ENST00000554777 306 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AC009097.3-201ENST00000563557 1018 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AC122134.1-201ENST00000565664 1104 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 MIR4311-201ENST00000580794 100 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AC012616.1-201ENST00000600294 197 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 SNX6P1-201ENST00000601728 1224 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AC015726.1-201ENST00000602353 681 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AC021171.1-201ENST00000603137 706 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 IMMP1LP3-201ENST00000604197 224 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AC005252.1-201ENST00000604518 1063 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AP002802.2-201ENST00000605877 235 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AL359513.1-201ENST00000614364 557 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 C4BPAP1-201ENST00000415474 1893 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AL022393.1-201ENST00000625142 1677 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 RNU6-468P-201ENST00000384003 109 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 RNU1-77P-201ENST00000390868 162 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 RPL35AP24-201ENST00000413846 330 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 RAB9AP4-201ENST00000415230 609 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AC021876.1-201ENST00000425959 359 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 FO393414.1-201ENST00000428697 1184 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 RPL7L1P9-201ENST00000431298 745 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 MTCYBP21-201ENST00000443300 1113 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 RPL7P45-201ENST00000455851 743 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AC020779.1-201ENST00000478757 796 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 OR5H3P-201ENST00000502817 919 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 OR5M14P-201ENST00000506803 618 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 snoU109.5-201ENST00000516231 132 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 HAUS1P3-201ENST00000523909 662 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 OR10V3P-201ENST00000525712 725 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AP001804.1-201ENST00000526868 919 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AL049779.2-201ENST00000553847 315 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AL442163.2-201ENST00000553912 710 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AC006115.2-201ENST00000596823 202 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 NANOGP3-201ENST00000605855 286 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AC245008.1-201ENST00000608123 476 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AL121594.5-201ENST00000631724 573 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 FRG1DP-201ENST00000635586 771 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AC083865.1-201ENST00000636634 831 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AP002512.4-202ENST00000641599 4530 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 AL355578.1-201ENST00000607405 1328 ntBASIC6.48□□□□□ -1.37
CTDP1Q9Y5B0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
CTDP1Q9Y5B0 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CTDP1Q9Y5B0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.47□□□□□ -1.37
CTDP1Q9Y5B0 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.47□□□□□ -1.37
CTDP1Q9Y5B0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CTDP1Q9Y5B0 AL590763.1-201ENST00000398297 1545 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms