Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 AC004817.4-201ENST00000602396 3625 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 RN7SKP113-201ENST00000363891 295 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 SNORA74A-201ENST00000364089 198 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 U3.36-201ENST00000408418 213 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 RN7SKP213-201ENST00000410746 298 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AC211486.3-201ENST00000412694 621 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 RPL23AP27-201ENST00000415161 451 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 OR51A6P-201ENST00000418680 1004 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 BTF3P9-201ENST00000418784 283 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 MTCYBP7-201ENST00000419540 1134 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 COX6CP13-201ENST00000428703 226 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 BX323845.1-201ENST00000432417 179 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 RPL7AP61-201ENST00000443410 636 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 CALM1P2-201ENST00000452941 448 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 MTND3P4-201ENST00000453537 303 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AC245028.2-201ENST00000458673 253 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AC091180.1-201ENST00000462104 372 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AC021660.1-201ENST00000465006 554 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 RPSAP50-201ENST00000481955 852 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AC147055.3-201ENST00000510547 851 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 EIF4A2P5-201ENST00000529914 499 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 OR8X1P-201ENST00000534542 869 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AP005262.1-201ENST00000582646 997 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 BMS1P7-201ENST00000602440 1052 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AP004372.1-201ENST00000604842 844 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AC034236.3-201ENST00000605999 461 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AC239803.2-201ENST00000610161 430 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 MIR7155-201ENST00000615925 56 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 BNIP3P41-202ENST00000616656 861 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 AC037198.3-201ENST00000616754 526 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 MUC2-202ENST00000613187 4845 ntBASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.82□□□□□ -1.64
ATG4BQ9Y4P1 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 SMG1P4-204ENST00000523028 4131 ntBASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 RNU1-106P-201ENST00000384382 164 ntBASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 AMZ2P2-201ENST00000406819 1057 ntBASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 SETP15-201ENST00000412724 337 ntBASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 RPL23AP4-201ENST00000427757 463 ntBASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 Z99127.2-201ENST00000441426 334 ntBASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 BX284632.1-201ENST00000478218 541 ntBASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 RPL32P9-201ENST00000487963 407 ntBASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 AL390334.1-201ENST00000556395 450 ntBASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 MIR4443-201ENST00000585052 53 ntBASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 AC005229.3-201ENST00000603438 323 ntBASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 AC018695.5-201ENST00000605872 315 ntBASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 AC009163.6-201ENST00000612367 342 ntBASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 AL122125.1-201ENST00000616999 600 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms