Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 GAPDHP15-201ENST00000398586 975 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 RPS4XP9-201ENST00000405151 780 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 AC016831.4-201ENST00000438302 307 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 RN7SL481P-201ENST00000477764 299 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 AC090686.1-201ENST00000481577 749 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 AC209154.1-201ENST00000582156 337 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 AL161616.1-201ENST00000611867 286 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 MIR6853-201ENST00000619642 74 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 AC139426.3-201ENST00000605648 2059 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 AC010928.1-201ENST00000592477 1447 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 E2F6P2-201ENST00000420708 748 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 AC114982.2-201ENST00000461396 358 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 HMGB3P16-201ENST00000508037 287 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 RNU2-30P-201ENST00000516209 141 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 OR5M2P-201ENST00000529003 936 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 AC073091.2-201ENST00000603205 907 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 AL023583.1-201ENST00000607518 1143 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 AC018690.1-201ENST00000608144 626 ntBASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 TET1P1-201ENST00000426627 2301 ntBASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 AC135352.1-201ENST00000506173 1418 ntBASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 AL672167.1-204ENST00000641875 3017 ntBASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 KARSP3-201ENST00000571212 1504 ntBASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 SNORA70F-201ENST00000384142 135 ntBASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 RNU6-398P-201ENST00000384143 109 ntBASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 AL356967.1-201ENST00000406305 431 ntBASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 CTSL3P-202ENST00000412179 788 ntBASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 AC019050.1-201ENST00000418508 492 ntBASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 NMNAT1P2-201ENST00000435192 860 ntBASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 AC006967.1-201ENST00000467608 589 ntBASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 AC023424.1-201ENST00000496058 459 ntBASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 AC068790.4-201ENST00000602474 263 ntBASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 AC006363.1-201ENST00000603806 463 ntBASIC6.43□□□□□ -1.38
NPC1L1Q9UHC9 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 AC099654.3-201ENST00000447087 1546 ntBASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 AC079741.1-201ENST00000321498 212 ntBASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 ATG4AP1-201ENST00000416893 538 ntBASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 AC140479.3-201ENST00000418944 1126 ntBASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 C4BPAP2-201ENST00000428434 478 ntBASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 RPSAP41-201ENST00000439695 860 ntBASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 NDUFA5P9-201ENST00000472609 340 ntBASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 AK4P6-201ENST00000505168 528 ntBASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 RNA5SP249-201ENST00000516127 99 ntBASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.42□□□□□ -1.38
NPC1L1Q9UHC9 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms