Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC016027.4-201ENST00000450866 277 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 MTND1P27-201ENST00000451117 902 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC092865.4-201ENST00000477936 615 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 RPL23AP37-201ENST00000479658 549 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC073610.1-201ENST00000489971 396 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC104971.1-201ENST00000495117 578 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 LSM3P4-201ENST00000502948 309 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC093755.1-201ENST00000512950 1023 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 RNU6-1004P-201ENST00000516584 111 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 MIR3912-201ENST00000577566 105 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AP001981.2-201ENST00000603241 418 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC009237.12-201ENST00000604755 742 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC004223.4-201ENST00000612426 332 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AL354854.1-201ENST00000455940 1363 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AC004656.1-201ENST00000568479 4951 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AC093225.1-201ENST00000506867 1408 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 Y_RNA.192-201ENST00000363977 102 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 MIR137-201ENST00000385223 102 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AL590806.1-201ENST00000415818 853 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AC015977.1-201ENST00000418887 292 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AC016027.5-201ENST00000427227 210 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AC244035.1-201ENST00000430042 390 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 YWHAEP5-201ENST00000431545 765 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 PPIAP27-201ENST00000453800 265 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 Z83838.1-202ENST00000456225 839 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 RPL23AP40-201ENST00000487630 390 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AL035690.1-201ENST00000490892 383 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 PRELID3BP7-201ENST00000503606 469 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 CDH12P2-201ENST00000504393 298 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AC073358.1-201ENST00000505671 684 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AC008885.2-201ENST00000509506 930 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AC116353.3-201ENST00000511215 249 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 MTATP6P1-201ENST00000514057 681 ntBASIC6.25□□□□□ -1.41
PPARGC1AQ9UBK2 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms