Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 AC020910.3-201ENST00000603701 874 ntBASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 AC011503.2-201ENST00000594230 1500 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 AP000542.2-201ENST00000623199 6179 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 RNVU1-6-201ENST00000364688 164 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 RNA5SP113-201ENST00000410486 84 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 HYALP1-201ENST00000417674 1279 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 AL034379.1-201ENST00000423216 253 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 RPL7AP61-201ENST00000443410 636 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 SLC25A18P1-201ENST00000449385 454 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 OR6C72P-201ENST00000451403 892 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 AL691482.1-201ENST00000453255 87 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 RPS17P2-201ENST00000461663 408 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 AC116562.1-201ENST00000485355 781 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 AL671862.1-201ENST00000515851 349 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 MORF4L1P3-201ENST00000525966 950 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 AC040958.1-201ENST00000561102 201 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 UBE2FP2-201ENST00000566646 462 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 AP000919.1-201ENST00000582850 985 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 MIR6820-201ENST00000611508 62 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 AC243960.7-201ENST00000623532 707 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 PROS2P-201ENST00000474651 1951 ntBASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.41□□□□□ -1.7
CLCF1Q9UBD9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.4□□□□□ -1.7
CLCF1Q9UBD9 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.4□□□□□ -1.7
CLCF1Q9UBD9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CLCF1Q9UBD9 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CLCF1Q9UBD9 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CLCF1Q9UBD9 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CLCF1Q9UBD9 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CLCF1Q9UBD9 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CLCF1Q9UBD9 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CLCF1Q9UBD9 PCAT14-202ENST00000627127 3935 ntBASIC4.4□□□□□ -1.7
CLCF1Q9UBD9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
CLCF1Q9UBD9 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.4□□□□□ -1.7
CLCF1Q9UBD9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 FABP7P2-201ENST00000429946 379 ntBASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 RAB9AP5-201ENST00000437794 597 ntBASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 RAB9AP2-201ENST00000443911 597 ntBASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 AURKAPS2-201ENST00000454983 333 ntBASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 RPS29P22-201ENST00000472363 168 ntBASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 AC007686.1-201ENST00000488511 463 ntBASIC4.4□□□□□ -1.71
CLCF1Q9UBD9 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms