Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 AC107958.1-201ENST00000556576 290 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 GTF2IP8-201ENST00000560687 584 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 AC006960.3-201ENST00000561845 705 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 AC024560.3-201ENST00000608482 349 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 AP001264.1-201ENST00000620602 703 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 MTND1P37-201ENST00000636562 264 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 ZNRD1ASP-221ENST00000637794 1074 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 AL359091.1-201ENST00000449048 1734 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CNTN3Q9P232 OSBPL9P1-201ENST00000604744 1469 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CNTN3Q9P232 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CNTN3Q9P232 AC062022.1-201ENST00000451026 1684 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.02□□□□□ -1.28
CNTN3Q9P232 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC135352.1-201ENST00000506173 1418 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CNTN3Q9P232 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CNTN3Q9P232 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
CNTN3Q9P232 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CNTN3Q9P232 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CNTN3Q9P232 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CNTN3Q9P232 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CNTN3Q9P232 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC009120.2-204ENST00000621548 2032 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CNTN3Q9P232 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 Y_RNA.61-201ENST00000362835 102 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 RNU5F-7P-201ENST00000363696 115 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 RNU6-374P-201ENST00000364146 108 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 Y_RNA.256-201ENST00000364594 104 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 RN7SKP226-201ENST00000364912 300 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CNTN3Q9P232 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 Y_RNA.408-201ENST00000383987 102 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 RN7SKP285-201ENST00000410137 318 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 RN7SKP86-201ENST00000410454 332 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CNTN3Q9P232 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC003989.1-201ENST00000434569 565 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC092427.1-201ENST00000439177 601 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC004865.1-201ENST00000442276 1003 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 TIMM8BP2-201ENST00000445940 251 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AL034418.1-201ENST00000448675 860 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AL606490.1-201ENST00000452266 765 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 IGHV3-63-201ENST00000518422 341 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC008802.1-201ENST00000519121 791 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 IGJP1-201ENST00000522682 475 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC109635.6-201ENST00000525487 1113 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC023310.2-201ENST00000553844 547 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 RN7SL230P-201ENST00000580835 303 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC006504.3-201ENST00000586818 523 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC125494.2-201ENST00000602431 657 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AL953862.2-201ENST00000603089 820 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 SEPT7P9-203ENST00000604116 343 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC104458.1-201ENST00000608243 463 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC011472.4-201ENST00000615848 491 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC009704.2-201ENST00000618739 483 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC018816.2-201ENST00000621460 353 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AL122023.1-201ENST00000622847 530 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC004836.1-201ENST00000623032 634 ntBASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CNTN3Q9P232 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.02□□□□□ -1.29
CNTN3Q9P232 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
CNTN3Q9P232 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CNTN3Q9P232 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms