Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 IGBP1P4-201ENST00000503202 879 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 MIR4509-3-201ENST00000578671 94 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 MIR4509-2-201ENST00000583920 94 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 AC011447.4-201ENST00000587562 111 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 AP002884.5-201ENST00000595053 1132 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 AC008536.1-201ENST00000602872 669 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 AC008814.1-201ENST00000603797 406 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 AC069431.2-201ENST00000604149 1099 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 AL162431.4-201ENST00000604674 411 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 MIR4509-1-201ENST00000618224 94 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 AC083865.1-201ENST00000636634 831 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL20A1Q9P218 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL20A1Q9P218 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.98□□□□□ -1.45
COL20A1Q9P218 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.98□□□□□ -1.45
COL20A1Q9P218 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL20A1Q9P218 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL20A1Q9P218 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.98□□□□□ -1.45
COL20A1Q9P218 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
COL20A1Q9P218 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.98□□□□□ -1.45
COL20A1Q9P218 CASC19-281ENST00000642118 1554 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL20A1Q9P218 SNURFL-201ENST00000309296 343 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 RN7SKP104-201ENST00000362605 328 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 RNU4-7P-201ENST00000364758 141 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL20A1Q9P218 RNU6-1263P-201ENST00000384601 106 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 MIR600-201ENST00000385007 98 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 NUDT19P3-201ENST00000404698 555 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 MIR1182-201ENST00000408363 97 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 AL133482.1-201ENST00000415988 498 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 AC093162.1-201ENST00000419682 124 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 EIF4A1P1-201ENST00000420241 934 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 DEFB130D-201ENST00000426866 237 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 AC092447.2-201ENST00000435487 669 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.98□□□□□ -1.45
COL20A1Q9P218 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.98□□□□□ -1.45
COL20A1Q9P218 CEACAMP7-201ENST00000444105 496 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 NOP56P2-201ENST00000447491 769 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 CALM1P2-201ENST00000452941 448 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL20A1Q9P218 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.98□□□□□ -1.45
COL20A1Q9P218 GTF2F2P1-201ENST00000511083 675 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 AC004980.4-201ENST00000513375 203 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 HMGN1P9-201ENST00000515212 298 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 RN7SKP66-201ENST00000516681 231 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.98□□□□□ -1.45
COL20A1Q9P218 IGHV3-63-201ENST00000518422 341 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 MTND2P32-201ENST00000521584 1038 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 AC013701.1-201ENST00000522657 465 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 AC109635.6-201ENST00000525487 1113 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 AC092490.3-201ENST00000545370 572 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.98□□□□□ -1.45
COL20A1Q9P218 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.98□□□□□ -1.45
COL20A1Q9P218 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.98□□□□□ -1.45
COL20A1Q9P218 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.98□□□□□ -1.45
COL20A1Q9P218 MIR4436B2-201ENST00000581415 91 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 MIR4436B1-201ENST00000583272 91 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.98□□□□□ -1.45
COL20A1Q9P218 AC093388.1-201ENST00000609166 430 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 RMST_10.1-201ENST00000616309 154 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 AL137141.1-201ENST00000624622 4836 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL20A1Q9P218 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL20A1Q9P218 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.98□□□□□ -1.45
COL20A1Q9P218 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL20A1Q9P218 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL20A1Q9P218 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL20A1Q9P218 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL20A1Q9P218 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL20A1Q9P218 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.98□□□□□ -1.45
COL20A1Q9P218 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 AC023421.1-201ENST00000590535 1785 ntBASIC5.98□□□□□ -1.45
COL20A1Q9P218 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL20A1Q9P218 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL20A1Q9P218 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL20A1Q9P218 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.97□□□□□ -1.45
COL20A1Q9P218 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.97□□□□□ -1.45
COL20A1Q9P218 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.97□□□□□ -1.45
COL20A1Q9P218 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL20A1Q9P218 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL20A1Q9P218 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL20A1Q9P218 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms