Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 ANKRD36P1-201ENST00000344424 659 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 RNU6-224P-201ENST00000384055 107 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 RPS3AP2-201ENST00000407190 754 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AL592310.1-201ENST00000414330 671 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AK4P4-201ENST00000419465 646 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AC127526.2-201ENST00000426436 775 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 MTND6P12-201ENST00000428247 522 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 PTGES3P1-201ENST00000439531 483 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AC002542.1-201ENST00000440683 193 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 OR10R1P-201ENST00000441524 1141 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 EIF2S2P2-201ENST00000447161 982 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AC005002.1-201ENST00000447458 540 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AL050341.1-201ENST00000447743 313 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 CBX1P2-201ENST00000453841 458 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 RPL12P39-201ENST00000455456 496 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 RPL7AP52-201ENST00000458096 790 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 RNU1-88P-201ENST00000459274 128 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AC006539.1-201ENST00000481419 501 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AC012123.2-201ENST00000485809 248 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AC020699.1-201ENST00000505161 445 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 PRELID3BP4-201ENST00000515476 571 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AC078899.1-201ENST00000521432 1185 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AP000859.1-201ENST00000525536 307 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AC079600.1-201ENST00000550326 297 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AC009948.4-201ENST00000604692 675 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AL133481.2-203ENST00000607558 139 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 VN1R74P-201ENST00000613259 503 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 AL035461.2-201ENST00000619201 524 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 RNF6P1-201ENST00000444889 1784 ntBASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
NECTIN3Q9NQS3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AC015689.2-201ENST00000528172 1738 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 AC020633.1-201ENST00000468439 2247 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NECTIN3Q9NQS3 MIR375-201ENST00000362103 64 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms