Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AC004825.1-201ENST00000555068 586 ntBASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AC015911.5-201ENST00000587076 451 ntBASIC5.29□□□□□ -1.56
PCDH9Q9HC56 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 ABI1P1-201ENST00000603375 1120 ntBASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AC006363.1-201ENST00000603806 463 ntBASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AC120053.1-201ENST00000607706 736 ntBASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AL355816.2-201ENST00000610049 647 ntBASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AC015914.2-201ENST00000618167 288 ntBASIC5.29□□□□□ -1.56
PCDH9Q9HC56 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AP002505.2-201ENST00000623585 696 ntBASIC5.29□□□□□ -1.56
PCDH9Q9HC56 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 Z95331.1-201ENST00000623075 23112 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 PABPC1P6-201ENST00000445594 1829 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 RNU1-43P-201ENST00000365052 165 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 SNORD51.1-201ENST00000365405 77 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 MIR620-201ENST00000385232 95 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 ST13P16-201ENST00000401760 781 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 SEPT7P8-201ENST00000413308 775 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 MTND4P24-201ENST00000424002 397 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AC245047.2-201ENST00000441060 530 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AC022336.1-201ENST00000475510 337 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AC020779.1-201ENST00000478757 796 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 RN7SL30P-201ENST00000488416 306 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AC073073.1-201ENST00000493920 463 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AK4P6-201ENST00000505168 528 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AC093763.2-201ENST00000505334 1223 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 GTF2F2P1-201ENST00000511083 675 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 RNU6-319P-201ENST00000516025 108 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 VTA1P2-201ENST00000520205 911 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AP003102.1-201ENST00000525638 661 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 OR8A2P-201ENST00000528631 952 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AC113192.3-201ENST00000529152 742 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AC093510.2-201ENST00000562820 896 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 MIR1269B-201ENST00000580405 75 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 SUMO2P15-201ENST00000604285 278 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AP005432.2-201ENST00000608162 586 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AC135068.12-201ENST00000637370 931 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PCDH9Q9HC56 AC025574.1-201ENST00000554784 1653 ntBASIC5.28□□□□□ -1.56
PCDH9Q9HC56 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 SNORD115-48-201ENST00000364764 76 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 MIR137-201ENST00000385223 102 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 MIR323B-201ENST00000385269 82 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 NUDT19P3-201ENST00000404698 555 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AL355433.1-201ENST00000422804 300 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 OR5M12P-201ENST00000423388 929 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 EI24P4-201ENST00000423683 1078 ntBASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDH9Q9HC56 AC000374.1-201ENST00000434698 1745 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms