Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RN7SKP6-201ENST00000364795 319 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 RNU6-207P-201ENST00000384137 107 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 RNU6-298P-201ENST00000390888 96 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 RPL10P10-201ENST00000403509 664 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 GTF2IP5-201ENST00000414608 731 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 REREP1Y-201ENST00000422655 198 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 RPS7P2-201ENST00000435134 607 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 FMO7P-201ENST00000436045 768 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 REREP2Y-201ENST00000439103 200 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 MTND1P33-201ENST00000446251 917 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 EXOSC3P1-201ENST00000448649 500 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 RPS17P11-201ENST00000474297 293 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AC020779.1-201ENST00000478757 796 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AC008427.1-201ENST00000503102 655 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AC093720.1-201ENST00000505681 714 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AC021146.7-201ENST00000509604 775 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AC021193.1-201ENST00000511607 420 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AC133963.2-201ENST00000513686 578 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AP001207.2-201ENST00000519490 539 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 OR8G3P-201ENST00000533406 921 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AP000916.1-201ENST00000533869 835 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AP005403.1-201ENST00000579720 229 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AP000769.2-201ENST00000602344 396 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AC108738.1-201ENST00000603703 237 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AC087683.2-201ENST00000611384 326 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AL669942.2-201ENST00000620352 697 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 MIR6719-201ENST00000622428 87 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 CASC19-264ENST00000641912 1184 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 SAMMSON-227ENST00000642114 1199 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AL590763.1-201ENST00000398297 1545 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 RNU1-19P-201ENST00000363306 165 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 SNORA74A-201ENST00000364089 198 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 SNORD56.6-201ENST00000384569 71 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 MIR551A-201ENST00000385042 96 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 PCNPP4-201ENST00000414817 517 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 PTP4A1P1-201ENST00000420539 515 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 AL133173.1-201ENST00000423458 397 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 CFL1P1-202ENST00000432948 411 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 MTND2P8-201ENST00000450555 1025 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 AL606490.1-201ENST00000452266 765 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 IGBP1P4-201ENST00000503202 879 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 EEF1A1P37-201ENST00000522748 715 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 LRRC34P1-201ENST00000542742 915 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 MRPS21P7-201ENST00000566937 238 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 AL022067.1-201ENST00000602426 454 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 AC006363.1-201ENST00000603806 463 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 AP002802.2-201ENST00000605877 235 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 OR7A19P-201ENST00000608051 733 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.61□□□□□ -1.51
USP29Q9HBJ7 AC007204.2-201ENST00000615022 616 ntBASIC5.61□□□□□ -1.51
USP29Q9HBJ7 AC018445.2-201ENST00000622987 260 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms